Rhodovastum atsumiense: RHOA_2425
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Entry
RHOA_2425 CDS
T08162
Symbol
crtE
Name
(GenBank) Geranylgeranyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00900
Terpenoid backbone biosynthesis
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RHOA_2425 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rap01006
]
RHOA_2425 (crtE)
Enzymes [BR:
rap01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RHOA_2425 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RHOA_2425 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
RHOA_2425 (crtE)
Prenyltransferases [BR:
rap01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RHOA_2425 (crtE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAH2601037
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All DBs
Position
RHOA:2494130..2494999
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AA seq
289 aa
AA seq
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MDATSRIERALAAAVARAEGLGGPPKLAEAMHYSVFPRGARIRPRLCLAVARACGDDEPA
ITDAAAASIELMHCGSLVHDDLPCFDDADIRRGKPAVHKAFGEQIAVLAGDALIVMAFQV
LAWATVSRPERLSHLMLTLGRAVGAPSGIIAGQAWECEPVIDLAEYQQEKTGALFAAATV
MGAAAAGMEAEPWRLLGERLGEAYQVADDIRDVASSREDLGKPIGQDAALGRPSAVAQLG
MQGALARLKDLAAGAVAAIPDCPGAAELRAHILSESQRLVPPKLAAAAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacttcgcgaatcgaacgggccctggcggctgccgtggcacgagccgagggc
ctgggcggtccgccgaagctggccgaggccatgcattactccgtgttcccgcgcggcgca
cgcatccgtccgcggctttgcctggccgttgcgcgcgcctgcggcgacgacgagccggcg
atcaccgatgccgccgcggcttcgatcgagttgatgcattgcggttcgctggtgcacgac
gacctcccctgcttcgacgacgccgacatacgtcgggggaaacccgccgttcacaaggct
ttcggggaacagattgcggtattggccggtgacgcgctgatcgtcatggcgttccaggtg
cttgcctgggccacggtcagccggccggagcggttgtctcacctgatgctgacgctcggc
cgcgccgtcggcgcgccctccggcatcatcgccggccaggcctgggaatgcgagccggtg
atcgaccttgccgaataccagcaggaaaagaccggcgcgctgttcgccgccgcgaccgtg
atgggggcggcggccgcgggcatggaggcggaaccctggcgcctgctcggcgagcggctc
ggcgaggcgtatcaggtcgccgacgacatccgcgacgtcgcttccagccgtgaggacctt
ggcaagccgatcggccaggacgcggcgctggggcggccgagcgcggtggcacagcttggc
atgcagggcgcgctggcgcggctgaaggatctcgctgccggcgccgtcgccgcgatcccg
gattgcccgggggcggccgaactgcgcgcccatatcctcagcgaatcgcagcggctggtg
ccgccgaagctggcggccgcggccgcctga
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