Rhodovastum atsumiense: RHOA_3011
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Entry
RHOA_3011 CDS
T08162
Symbol
sdhA
Name
(GenBank) succinate:quinone oxidoreductase, FAD binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00020
Citrate cycle (TCA cycle)
rap00190
Oxidative phosphorylation
rap00650
Butanoate metabolism
rap00720
Other carbon fixation pathways
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Module
rap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rap_M00149
Succinate dehydrogenase, prokaryotes
rap_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHOA_3011 (sdhA)
00650 Butanoate metabolism
RHOA_3011 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RHOA_3011 (sdhA)
00720 Other carbon fixation pathways
RHOA_3011 (sdhA)
Enzymes [BR:
rap01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RHOA_3011 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
CAH2601627
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All DBs
Position
RHOA:complement(3134976..3136787)
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AA seq
603 aa
AA seq
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MNAITKPSLGAYNVIDHTYDVVVVGAGGAGLRATFGIGAAGLKTACITKVFPTRSHTVAA
QGGIGAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCREAIPAVYELEHYGVPFSRT
EDGRIYQRPFGGHMTNFGKAPAMRACAAADRTGHAILHTLYQQSLKHDVEFFVEYFALDL
IMDEDGACRGVVAWNLEDGTIHRFRAQTVVLATGGYGRAYLSCTSAHTCTGDGNAMVLRA
GLPCQDMEFVQFHPTGIFPAGCLITEGARGEGGYLTNSEGERFMERYAPTAKDLASRDVV
SRSMTLEINAGRGCGPHKDHILLHLEHLGADILHERLPGISETARVFAGVDVTKEPIPVL
PTVHYNMGGIPTNVHTEVLRPTKDNPDAVVPGLMAVGEAACVSVHGANRLGTNSLLDLVV
FGRAAAHRAAETIRPGTSQAPLPARAGEYALDRLDSARHAKGGTKVADLRLELQRTMQAH
AAVFRNSESLTQGVEKMKKVWAGLSDIHVSDRSLIWNSDLMEALELQNLMGNAATTMTGA
EARKESRGAQAHDDFPERDDKNWMKHTLAWCDDAGNVRLDYRPVKMQTLTNEVSVIPPQK
RVY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcaccaagccttccctcggtgcctacaacgtcatcgaccacacctatgac
gtggtggtggtcggcgccggcggggccggcctgcgcgcgaccttcggcatcggcgcggcg
ggcctgaagacggcctgcatcaccaaggtcttccccacccgcagccataccgtggccgcc
cagggcggcatcggcgcggcgctgggcaacatgggcgaggacgactggcgctggcacatg
tacgacaccgtcaaggggtcggactggctcggcgaccaggacgccatcgaatacatgtgc
cgcgaggccatcccggcagtctacgagctggagcattacggcgtgccgttcagccgcacc
gaggacgggcgcatctaccagcgccccttcggcggccacatgaccaatttcggcaaggcg
ccggccatgcgcgcctgcgccgccgccgaccgcaccggccacgccatcctgcacacgctg
taccagcagtcgctgaagcacgacgtcgagttcttcgtcgagtatttcgccctcgacctg
atcatggacgaggacggcgcctgccgcggcgtggtcgcctggaaccttgaagacggcacc
atccaccgcttccgcgcccaaaccgtggtgctggccaccggcggctacgggcgggcctac
ctgtcctgcacctcggcccatacctgcaccggcgacggcaacgccatggtgctgcgcgcc
ggcctgccctgccaggacatggaattcgtgcagttccatccgaccggcatcttccccgcc
ggctgcctgatcaccgagggcgcccgcggcgagggcggctacctgaccaacagcgaaggc
gagcgcttcatggagcgctacgcgccgaccgcgaaggacctcgcctcgcgcgacgtggta
tcgcggtccatgacgctggagatcaacgccgggcgcggctgcggtccgcacaaggaccac
atcctgctgcacctggagcaccttggcgccgacatcctgcacgaacgcctgccgggcatt
tcggaaacggcgcgggtgttcgcgggcgtcgacgtcaccaaggagccgatcccggtgctg
ccgaccgtgcactacaacatgggcggcatccccaccaacgtacacaccgaggtgctgcgg
ccgaccaaggacaatcccgacgcggtcgtccccgggctgatggccgtgggcgaggccgcc
tgcgtctcggtgcacggcgccaaccgcctcggcaccaactcgctgctcgacctggtcgtg
ttcggccgcgccgccgcgcaccgcgccgccgagaccatccggccgggcacctcgcaggcg
ccgctgcccgcgcgcgcgggcgagtacgcgctcgaccggctggacagcgcgcgccacgcc
aagggcggcaccaaggtcgctgacctgcgcctggaactgcagcgcacgatgcaggcccac
gccgcggtgttccgcaacagcgagagcctgacccaaggcgtggagaagatgaagaaggtc
tgggccgggctttcggacatccacgtgtccgaccggtcgctgatctggaattccgacctg
atggaagcgttggaactgcagaacctgatgggcaacgccgccaccaccatgaccggcgcg
gaagcccgcaaggaaagccgtggcgcgcaggcgcatgacgacttccccgagcgcgacgac
aagaactggatgaagcacacgctggcctggtgtgacgacgccggcaacgtccgcctcgac
taccgcccggtgaagatgcagacgctgaccaacgaagtgtcggtcattcccccgcagaag
cgcgtctactga
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