Rhodovastum atsumiense: RHOA_3104
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Entry
RHOA_3104 CDS
T08162
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00541
Biosynthesis of various nucleotide sugars
rap01100
Metabolic pathways
rap01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RHOA_3104 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
RHOA_3104 (hldD)
Enzymes [BR:
rap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RHOA_3104 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
Core region
RHOA_3104 (hldD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAH2601720
LinkDB
All DBs
Position
RHOA:3218994..3219968
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AA seq
324 aa
AA seq
DB search
MILITGGAGFIGSNLHAALAARGHETIVVDRLRSDGKWHNLAHHPPTAIVAPEELQNFLA
LQPPIEMVFHLGAISATTATDGDLVWHTNVGLSQELWKWCSSLGVRMIYASSAATYGAGA
QGFEDGLDDLGNLRPLNLYGWSKHAFDLSVARAVAGRRKRPPQWVGLKFFNVYGPNEYHK
GSQVSVVKVKYDEVRRGQAPRLFRSDRPDVADGEQKRDFIWVGDVVDVLLWLQDTPGVSG
LFNVGTGQARSYRDLAHAVCRAGGAKEDIEFIDMPANLRGQYQSFTEARMDRLRAAGYTK
PFTSLEDGINRYITEYLAMPDPYV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgatcactggcggcgccggcttcatcggttcgaatctgcatgcagcgctggct
gcgcggggccacgagacgatcgtggtcgatcgcctgcgcagcgacggcaagtggcacaac
ctcgcgcaccatccgccgaccgcgattgtcgcgccggaagagctgcagaatttcctcgcc
ctgcagccgccgatcgagatggtgttccatctcggcgcgatcagcgccaccacggcgacc
gatggcgacctggtctggcacaccaatgtcggcctgtcgcaggagctgtggaaatggtgt
tcctcgctcggggtgcggatgatctacgcctcctcggcggcgacctacggggccggcgca
cagggcttcgaggatgggctggacgatcttggcaatttgcgtccgctcaatctttacggc
tggtccaagcacgccttcgacctgagcgtggcgcgcgccgtggccgggcggcgcaagcgg
ccgccgcaatgggtgggcctgaaattcttcaacgtctacgggccgaacgagtaccacaag
ggatcgcaggtctcggtggtgaaggtgaaatacgacgaggtgcggcgcggccaggcgccg
cggctgttccgcagcgaccggcccgatgtcgcggatggcgagcagaagcgcgacttcatc
tgggtcggcgatgtcgtggacgtgctgctctggctgcaggacacgccgggcgtgagcggg
ctgttcaatgtcggcaccggccaggcgcgcagctatcgcgacctcgcccacgcggtctgc
cgcgcgggtggggcgaaggaagacatcgagttcatcgacatgccggccaatctgcgcggc
cagtaccagtccttcaccgaggcgcgcatggatcgcctgcgcgcggccggctacacgaag
cccttcacctcgcttgaagacggcatcaaccgctatatcaccgagtatctggcgatgccg
gatccctacgtctga
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