Rhodovastum atsumiense: RHOA_3382
Help
Entry
RHOA_3382 CDS
T08162
Name
(GenBank) Autotransporter domain-containing protein
Organism
rap
Rhodovastum atsumiense
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autotransporter
VacA_C
PATR
Motif
Other DBs
NCBI-ProteinID:
CAH2602008
LinkDB
All DBs
Position
RHOA:3499484..3503764
Genome browser
AA seq
1426 aa
AA seq
DB search
MPLKLAYSAVAASAALVATISSAYAAGDRPGAQSLSLNLFHTDIDTSKPYYKASSLFLLD
TPSFKGGTLRTNLNLGIYLQNFTLDGSSTNTIDQYGKNTLFTGVFSDARNGTPGNITFAN
SQDGGSTTLAGINTYTGRTTIDSGATLILLGLGSIASSSDVVDNGTLDISLTLMGTSIRS
LSGNGSVDLGWQRLTLSDASGTFDGSISGHGGLTVAGGTETLSSTNTYTGRTTIDNGATL
ALSGSGSIAASSRVVANGRFDISATDNGASIRSLSGNGAVALGTQTLTLSNAWGRFGGDI
GGSGGLTVAGGTETLTGTNSYTGLTTIESGARLALAGHGSIAASSGVVDNGNFDISRTRH
GASISSLSGSGTVSLGRRTLTLSDASGTFSGGIGGRGGLTVAGGTETLSGTNTYTGRTAI
DAGATLALSGSGSIAASSEVAANGTFDISATSDGASIRTLSGNGSVALGAQTLTLSNASG
TFDGGIDGSGGLSVAGGTATLTGTNTYSGQTGIGSGATLALSGGGSIAASSEVVDNGTFD
ISATSNGASIRSLSGGGAVALGVQTLTLSDAGGTFVGAIDGSGGLTVAGGTEILTGTNTY
TGQTGIGAGATLALSGIGSIAASSEVVANGRFDISATDNGTSIRSLSGSGGIDLGAQTLT
LSNAAGTFSGSIDGSSGMSVTGGTETLTGTSTYTGQTGIGTGATLALSGLGSIAASSGVI
DNGIFDISATTRGATIRSLAGGGTVTLGAQTLTLSDAGGTFSGSIGGSGGVTVTGGTETL
TGTSTYTGLTTINPGATLALTGSGSIAASEGVLDNGVFDISATSNGATIRTLAGTGTVNL
GAQKLTLTGAADHFTGTIAGGGALVLAAGTEVLNGVVSGTMDMTIDAGSLFFNNGTIAAA
SLIVDGTLRGTGLIRTPTTVNGVLAPGNSPGTMSFTAPLTLTAGSVTTFDIDGTGTSNGA
GNYSRIVSTDSVTVGGTLQPVLRGITGSASNSFVPVLGQQFQVITAAGGVQGSYGGMAPA
NGATDGLPAGTRFDALYAPTTLTLVVTPASYGNLSLAGLPETGNQQAVGSALDALRPAAG
VRMDADAARLFYPLYTLSGPAIAPAFEQLSPTIYGYGMLTARDTWYDVAATVGDQLAARR
AGDSAGANTAQTRSGLTFWATGLGRFTDISGSGAPSAHSSVGGMVAGVDYAVAPDTVIGF
AAGGSHASTRSNGASIDGDAVNLSVYGGHRSGLFFVDGQAAYMHADQDATRNLSAWGQGV
RGSRDVDGGGVQVDAGLALTADAWRIEPTVGFSALSLSGGALQERGTAPLAERIDGQSLT
SLQSLVGVRFGTSFAVTPTMPLRVQGLVGWQHEYGTAIPRGTAALTLASTAPFSYATTSV
GRDTARIGAGMDMQITQAVGIYASYRAGFAQNATSQNITGGLRVTW
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttaaagctcgcctatagtgcggttgccgccagcgccgccctcgttgcgaccatc
tcctcggcttatgccgccggtgacaggcccggggcgcaaagcctctccttgaatctcttt
cacacagatatcgatacatcaaagccttattataaagccagttcgctgtttctgctcgat
acgccatcgttcaaaggtggcacgttgcggactaacctgaatcttggcatatatttacag
aattttacccttgatggttccagcaccaacacgatagatcagtacgggaaaaatacgtta
ttcaccggcgtattctcggacgcgaggaacggaacccccggcaacatcaccttcgccaac
agccaggacggtggcagcaccactcttgccggcatcaacacctataccggccgaaccacg
atcgatagtggcgcgacgctgatcctgctgggccttggcagcatcgcctcgtcctcggat
gtggtcgataacggcacactcgacatctccctgaccctcatgggcaccagcatccgcagt
ctttcgggcaatggcagtgtcgatctcggctggcagaggctgacgctgagcgacgccagc
ggcacgttcgacggcagcatcagcggtcacggcgggctgacggtcgcgggcggcaccgag
acgctcagcagcaccaacacctacaccggccgaaccacgatcgataacggcgcgacgctg
gcgctgtcggggagcggcagcatcgccgcatcctcgcgggtggtcgccaacggccgcttc
gacatttccgccaccgacaacggcgccagcatccgcagtctttcgggcaacggcgctgtc
gccctcgggacgcagacgctgacgctgagcaatgcctggggcaggttcggtggcgacatc
ggcggcagtggcgggctgacggtcgcgggcggcaccgagacgctcaccggcaccaacagc
tataccggcctgaccaccatcgagtccggcgcgaggctggccctggcgggccatggcagc
atcgccgcttcctcgggcgtggttgacaacggcaacttcgacatctcccgcacccggcat
ggggccagcatcagcagcctctcgggcagcggcacggtctccctgggccggcggacgctg
acgctgagcgacgccagcggcacgttcagcggcggcatcggcggtcgcggcgggctgacg
gtcgcgggcggcaccgagacactcagcggcaccaacacctataccggccgcaccgccatc
gatgccggggcgacgctggcgctgtcgggaagcggcagcatcgccgcgtcctcggaggtg
gccgccaacggcacgttcgacatctccgccaccagcgacggcgccagcatccgcacgctt
tcgggcaacggcagcgttgccctcggggcgcagacgctgacgctgagcaatgccagcggc
acgttcgatggcggcatcgacggcagtggcgggctgagtgtcgcgggcggcaccgcgaca
ctcaccggcaccaacacctatagcggccagaccggcatcggcagcggtgcgacactggcc
ctgtccgggggcggcagcatcgccgcgtcctcggaggtggtcgacaacggcacgttcgac
atttccgccaccagcaacggcgccagcatccgcagcctctcgggcggtggcgctgtcgct
ctcggggtgcagacgctgacgttgagcgacgccggcggcacgttcgtgggggccatcgac
ggcagtggcgggctgacggtcgcgggtggcaccgaaatactcaccggcaccaacacctat
accggccagaccggcatcggcgccggtgcgacactggcgctgtcggggatcggcagcatc
gccgcctcttcggaggtggtcgccaacggccgcttcgacatctccgccaccgacaacggc
accagcatccgcagcctctcgggcagtggcggcatcgatctcggggcgcagacgctgacg
ctgagcaatgccgccggcacgttcagcggcagcatcgacggcagcagcggcatgagcgtc
accggcggcaccgagacgctgaccggcaccagcacctataccggccagaccggcatcggc
accggggcgacgctggcgctgtcgggcctgggcagcatcgctgcttcctcgggggtgatc
gacaacggcattttcgatatttcggccacgacccgcggcgccaccattcgcagccttgcg
ggcggcggcactgtcacgctcggggcgcagacgctgacgctgagcgatgccggtggcacg
ttcagcggcagcattggcggcagcggcggcgtgaccgtcaccggcggcaccgagacgctg
accggcaccagcacctataccggcctgaccaccatcaatcccggcgcgacgctggcgctg
acgggcagcggcagcatcgccgcctccgaaggcgtgctcgacaacggtgtctttgacatc
tccgccaccagcaacggtgccaccatccgcaccctcgccggcaccggaaccgtcaatctc
ggggcacagaaactgaccctgaccggtgccgccgatcacttcaccggcacgatcgccggc
ggcggcgcgctggtgctcgccgccggcaccgaggtcctcaacggcgtcgtcagcggcacc
atggacatgacgatcgatgccggttcgctgttcttcaacaacggcacgatcgccgcggcc
tcgctcatcgtggatggcacgctgcggggcaccggcctgatcaggacgccgaccacggtg
aacggcgtgctcgcgcccggcaacagtcccggcacgatgagcttcaccgctccgctcacg
ctgacggcggggtccgtcaccactttcgacatcgacggcaccggcaccagcaacggcgcg
ggtaattacagccgcatcgtctccaccgacagcgtcaccgtcggcggcacgctgcagccg
gtgctgcgcggcatcaccggatcagccagcaacagcttcgtcccggtgctgggccagcag
ttccaggtgatcacggcggcgggcggcgtgcagggcagctatggcgggatggcgccggcg
aacggcgccacggacgggctgccggccgggacgcgcttcgatgcgctgtatgcaccgacc
acgctgaccctggtggtcacgccggcgagctacggcaacctgtccctggccgggctgccg
gagacggggaaccagcaggcggtcggcagcgccctcgacgcccttcgtccggcggcgggc
gtgcgcatggatgccgatgccgcgcggctgttctatccgctctacaccttgtccggcccg
gccatcgccccggcgttcgaacagctctcgcccacgatctacggctacgggatgctgacg
gcccgcgacacctggtatgacgtggccgccaccgtcggggatcagctcgccgcgcgccgt
gccggcgacagcgccggcgccaacacggcgcagacccggtccggcctgactttctgggcc
accggcctcggtcgcttcaccgacatctccggcagcggcgcgccgagcgcgcacagctcg
gtgggtggcatggtggcgggcgtggattacgcggtggcgccggacacggtgatcggcttc
gccgccggcggcagccatgccagcacgcgcagcaacggcgcctcgatcgacggggacgcg
gtgaacctgtcggtctatggcggccaccgctccgggctgttcttcgtcgacgggcaggcc
gcctacatgcatgccgaccaggatgcgacgcgcaacctgagcgcctggggccagggcgtg
cgcggcagccgcgacgtggatggcggcggcgtgcaggtcgatgccgggctggcgctgacc
gccgatgcctggcgcatcgaaccgacggttggcttctccgcgctcagcctcagcggcggg
gcattgcaggagcgtggcaccgcgcccctggccgagcggatcgacgggcagtcgctgacc
agcctgcagagcctggtcggggtgcgcttcggcaccagcttcgccgtcacgccgacgatg
ccgctgcgcgtgcaggggctggtgggctggcagcacgaatacggcaccgccatcccgcgc
ggcaccgccgcgctgacgctggcgagcacggcgccgttcagctacgccaccacttcggtg
gggcgggacaccgcacgcatcggcgccgggatggacatgcagatcacccaggctgtcggc
atctatgccagctatcgcgccggcttcgcgcagaacgccacgtcgcagaacatcaccggc
ggcctgcgcgtcacctggtag
DBGET
integrated database retrieval system
