Rhodovastum atsumiense: RHOA_3532
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Entry
RHOA_3532 CDS
T08162
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rap03000
]
RHOA_3532
Transcription factors [BR:
rap03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RHOA_3532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_IclR
HTH_31
TetR_N
HTH_10
HTH_24
MerR_1
KR
GshA
Motif
Other DBs
NCBI-ProteinID:
CAH2602158
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All DBs
Position
RHOA:complement(3667773..3668819)
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AA seq
348 aa
AA seq
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MDERSNGTRRRRKMQRVTMTEVAASAGVSPSTVSLYLRKPTLVSPSVGETIGRAIERLGY
VPNLVAGGLAAAGSRVVSVIVPSVRNAFFADTVAALQETLAPSGLQVMLGHTDYGFDREE
TLVRTALSWAPAAIVIVGLEHGRGTRGLLMGAAAPVFEIWECGQHPIDTAVGFQHREVGR
AAATHLLARGRRHLAFLGARMADDYRAQYRADGFARRVTEQGAPAPLVLDAPDGASVALG
ARLLGQALAERRRIDGIACSNDLIALGALFECQRRGIAVPQAIGIVGFGALEFTGSCVPP
LTTIDPFGSRIGTMVGQRILARLQERSPSPPQPETIDTGFELVVRDST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaggagcaacgggacgcggcggcgccgcaagatgcagcgggtgacgatgacg
gaagtcgccgccagcgccggcgtctctccctccaccgtgtcgctttatctgcgcaagccg
acgctggtctcgcccagcgtcggcgagaccatcgggcgggcgatcgaacggctcggctac
gtgccgaacctggtcgcgggcggactggccgccgccggctcgcgcgtggtcagcgtgatc
gttccctcggtgcgcaacgccttcttcgccgataccgtggcggcgttgcaggaaacgctg
gccccctcggggctgcaggtcatgctcggccacaccgattacggcttcgaccgcgaggag
acgctggttcgcaccgccctgtcctgggccccggcagccatcgtcatcgtcgggctggag
catgggcgcggcacccgcggcctgctgatgggcgccgccgcgccggtgttcgagatctgg
gaatgcggccagcacccgatcgacaccgccgtcggtttccagcaccgcgaggtaggccgc
gccgccgccacccacctgctcgcgcgcgggcggcgccatctggccttccttggtgcccgg
atggccgacgactaccgcgcccagtaccgcgccgacggcttcgcgcgccgggtgacggag
cagggagcgccggccccgctggtgctcgatgccccggacggcgccagcgtggcgctcggc
gcccggctgctgggccaggccctggcagagcggcggcggatcgacggcatcgcctgctcc
aacgacctgatcgcgctcggcgccctgttcgaatgccagcgccgcggcatcgccgtgccg
caggcgatcggcatcgtcggcttcggcgccctggagttcaccggctcctgcgtgccgccg
ctgacgacgatcgacccgttcggcagccgcatcggcaccatggtcgggcaacgcatcctc
gcccggctgcaggaacgctccccctccccaccgcagcccgaaacgatcgataccggcttc
gagctggtggtgcgcgacagcacctga
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