Rhodovastum atsumiense: RHOA_3876
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Entry
RHOA_3876 CDS
T08162
Name
(GenBank) TonB-dependent receptor plug domain-containing protein
KO
K02014
iron complex outermembrane recepter protein
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_3876
Transporters [BR:
rap02000
]
Other transporters
Pores ion channels [TC:
1
]
RHOA_3876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CAH2602512
LinkDB
All DBs
Position
RHOA:4021170..4023344
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AA seq
724 aa
AA seq
DB search
MRPKTQTHSARRPSGLGLMTLASAAALAAGGARAQAPTPLPAVRVQADAELSRPVDASSL
GEAALANGRAATSDTARLLGTLPGVALQTGGAVSSLPVLRGLADDRVRILTDGMTAASAC
ANHMNPPLSYVDPTNVGRATVLPGVTPVSLGGDSIGGTILVDTPPPAFATEAESPRWDAS
VSTFYRSNGDSITTAGTVGAATQRVSLGYAGSWAQGHDYVDGNGNKVLSTNYQTANHQGT
LGVQGENSLFVLKGGVQIMPYQGFPNQRMDLKGNHSSYVNGSYTRDLGWGKVDLRLWWQD
VRHYMNFLADKGGDATGGMPMKTHGTTLGYRVKLDLPVGERHLLRVGSDLEALRLKDWWP
PVGTGMMSPNTYLNINNGTRTRLGVFGEWEARWTDAWSTLLGARIDTVWMDTGTVQPYSW
TSMMSAADIAAAKVFNAQNRARTDVNLDLTALTRYEATETLTGEFGYARKTRSPNLYERY
AWGAGNMAQSMIGWFGDVNYYRGNIDLKPEVAHTVSVSAVWHDAAKESWEARITPYYTYV
DDFIGVTRVGSLAQGGTTIAKLQFANRDAQIYGVDVSGRAVLWRGQDYGTVGVQGVIGWL
QGNYIDSGKSLYHMMPLNAQAALTHQLGGWTSRAELRLVAPKALVDGDRYEPSTPGFAVM
NLRTSYEWRNVRLDFAIENLLNQQYYEPLGGVDYADWRATGRVGELGSVPAPGRTFIAGV
TFRL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacccaagacacagacccattccgcgcgccggccctccgggcttggcctgatgacg
ctggcctccgccgccgcgctcgccgccggcggcgcccgggcgcaagccccgaccccgctt
ccggccgtgcgcgtgcaggccgatgccgagctgtcgcggccggtggacgcctccagcctt
ggcgaggcggcgctggccaatggccgtgccgccaccagcgacaccgcgcggctgcttggc
acgctgccgggggtggcgctgcagaccggcggggcggtgtccagcctgccggtgctgcgc
ggcctcgccgatgaccgggtgcgcatcctgaccgatggcatgactgccgcctcggcctgc
gccaaccacatgaacccgccgctgtcctatgtcgatccgaccaatgtggggcgggcgacg
gtgctgccgggggtgacgccggtcagcctgggcggcgacagcatcggcggcaccatcctg
gtcgacacgccgccgccggccttcgccaccgaagcggaaagcccacgctgggacgccagc
gtttccactttctaccgcagcaacggcgacagcatcaccaccgccggcacggtcggggcg
gcgacgcagcgggtcagcctgggctatgccgggtcctgggcgcagggccacgactacgtg
gacggcaacggcaacaaggtgctgtcgaccaactaccagaccgccaaccaccagggcacg
ctgggcgtgcagggcgagaacagcctgttcgtgctgaagggtggggtgcagatcatgccc
taccagggcttccccaaccagcgcatggacctgaagggcaaccacagcagctacgtcaac
ggcagctacacccgtgacctgggctgggggaaggtcgacctgcggctgtggtggcaggat
gtgcgccactacatgaacttcctggccgacaagggcggcgacgccaccggcggcatgccg
atgaagacgcatggcaccacgctcggctaccgggtgaagctggacctgccggtgggcgag
cgccacctgctgcgcgtcggcagcgacctggaggcactgcggctgaaggattggtggccg
ccggtcggcaccgggatgatgagcccgaacacctacctcaacatcaacaacggcacgcgc
acgcgcctgggcgtcttcggcgaatgggaggcacgctggaccgacgcctggagcacgctg
ctgggcgcgcgcatcgacacggtgtggatggataccggaacggtgcagccgtacagctgg
acctcgatgatgtcggccgccgacatcgccgcggcgaaggtgttcaacgcgcagaaccgg
gcgcgcaccgacgtcaatctcgacctgacggcgctgacccgctacgaggcgaccgagacg
ctgaccggcgagttcggctatgcgcgcaagacgcgctcgcccaacctgtacgagcgctat
gcctggggcgcgggcaacatggcgcagagcatgatcggctggttcggcgacgtgaactac
tatcgcggcaacatcgacctgaagccggaagtggcgcacaccgtcagcgtctccgcggtc
tggcacgacgccgcgaaggaatcgtgggaggcgcggatcacgccctactacacctatgtc
gacgacttcatcggcgtgacccgcgtgggcagcctcgcgcagggcggcaccaccatcgcc
aagctgcaattcgccaatcgtgatgcgcagatctacggtgtcgatgtgtccggccgggcg
gtgctgtggcggggccaggattatggcacggtaggcgtgcagggcgtgatcggctggctg
cagggcaactacatcgattccggcaagagcctgtatcacatgatgccgctgaacgcgcag
gcggcgctgacgcaccagctcggcggctggacgagccgggcggaactgcggctggtggcg
ccgaaggcgctggtggacggcgaccgctacgaaccctccacgccgggtttcgcggtgatg
aacctgcgcaccagctatgaatggcgcaacgtgcggctggatttcgccatcgagaacctg
ctgaaccagcaatactatgaaccgctgggcggggtggactatgccgactggcgcgccacc
ggccgggtgggcgagctgggcagcgtgccggcaccggggcggaccttcatcgccggggtg
acgttcaggctgtga
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