Rhodovastum atsumiense: RHOA_4102
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Entry
RHOA_4102 CDS
T08162
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00450
Selenocompound metabolism
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RHOA_4102
Enzymes [BR:
rap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RHOA_4102
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RHOA_4102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CAH2602756
LinkDB
All DBs
Position
RHOA:4261634..4263760
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AA seq
708 aa
AA seq
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MPEPEGHGLPDLAWLTQLANEMFHALPTSPGSPGPLPSGGVPAGVVPAGAPTTGLPTTGL
PRTAVPTGAFGGPGVSPASTPLPDAPDPGLAAPGIGGAHAAAAPLAARVPPPLPRSPTLP
GVTAGPATLGGIGLAPPSAPLPAAGPPVPPGTSFYFLDEGHRGAAALPDPTVPGASGPGP
SVPDVGQGTGAALAAAAPLTARAVPALPPVPALPGVSGPPGAQGGFGAPPPASPLPVVPA
LGPAIPGQEALQALLMPALPPPQARPAPSPGGPTPSLYFLQDLDGGGVPAGAMPASTPGA
GFDPHSRRGDFPILAERVNGRRLVWLDNGATTQKPRAVIERLVRFYEHENSNIHRAAHEL
AARATDAYEGAREVTRRFLNASAPEEIVFVRGTTEGINLVAQSWGRRFIGAGDEIVITWL
EHHANIVPWQMLAEQTGAKLKVAPVDDDGQVVLDAYANLLGPRTKLVALTQVSNALGTIT
PAQAMTAMAHAVGARVLIDGAQSVAHMRTDVQALGCDWFVFSGHKVFGPTGIGAVYGRRD
VLAETPPWQGGGNMIRDVTFEYTEYQDPPARFEAGTGNIADAVGLGAALDYVQQAGLEAI
GAHEHALLEHALHDLAHVPGLRLFGTAAEKAGVISFVIDGLDTQEIGKALNREGIAVRAG
HHCAQPILRRFGVEATVRASLALYNTHDDVDALVAAVRRIRTGITGLG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccgagggccacggactgccggacctggcgtggctgacgcaactggcgaac
gagatgttccacgcgctgccgaccagccccggatcgcccggcccgctgccttcgggcggg
gtgccggccggcgtggtgccggcgggggccccgacgacagggctgccgacgacagggctg
ccgaggacggcggtgccgacgggggcgttcggggggcctggcgtgtcaccggcctcgacg
ccattgcccgacgcgccggaccccggcctcgccgcccccggcatcgggggcgcccatgcc
gcggcggcaccgctggcggcccgcgtgccgccgccgctgccccgttccccgacgctgccg
ggcgtgacggccggtcccgccacgctgggcggcattggcctcgccccgccttcggcgccg
ctgcctgcggccgggccgccggtgccccccggcacgtcgttctacttcctcgacgagggc
caccggggcgcggccgcgctgcccgatcccaccgtgcccggcgcttctggtcctggcccc
tctgttcctgacgtggggcaggggaccggcgcggcgctggcagccgcggccccgctgacg
gcccgcgcggtgccggccttgccgccggtgccggccttgccgggggtctcggggccaccc
ggcgcgcagggcggtttcggcgcccccccgcccgcgtccccgctgcccgtcgtgccggcg
ctcggcccggccatcccggggcaggaggcattgcaggcgctgctcatgccggccctgccg
ccgccccaggcccggcccgcgccgtccccgggcggcccgacgccctcgctctatttcctc
caggatctggacgggggcggggtgccggccggggcgatgcccgcctccacgccgggggcc
ggcttcgatccgcactcccgccgcggcgacttcccgatcctggccgaacgggtgaacggg
cggcggctggtctggctcgacaacggcgccaccacgcagaagccgcgcgcggtgatcgag
cggctggtgcggttctacgaacacgagaactccaacatccatcgcgccgcgcacgagctt
gccgcccgtgccaccgatgcctacgagggggcccgcgaggtgacgcggcgcttcctgaat
gcgagcgcgcccgaggagatcgtgttcgtccgcggcaccaccgagggcatcaatctggtc
gcgcagagctggggccggcgcttcatcggcgcgggcgacgagatcgtcatcacctggctg
gagcaccacgccaacatcgtgccgtggcagatgctggccgagcagaccggggcgaagctg
aaagtggcgccggtcgacgatgacgggcaggtggtgctcgatgcctatgccaacctgctc
gggccgcggacgaagctggtggcgttgacgcaggtatcgaacgcgcttggtaccatcacg
cccgcgcaggcgatgacggcgatggcgcacgcggtcggggcacgggtgctgatcgacggg
gcgcaatcggtggcgcatatgcgcaccgacgtgcaggcgctcggctgcgactggttcgtc
ttctccggccataaggtgttcggccccaccggcatcggcgccgtctacggccggcgcgac
gtgctggcggaaaccccgccctggcagggcggcggcaacatgatccgcgacgtcaccttc
gagtacaccgagtaccaggacccgcccgcccgcttcgaggccggcaccggcaacatcgcc
gatgccgtggggctgggggcggcgctcgactacgtccagcaggccgggctggaggcgatc
ggcgcgcacgaacacgcgctgctggaacatgcgctgcatgacctcgcgcatgtccccggc
ttgcgcctgttcggcaccgcggcggagaaggccggggtgatttccttcgtgatcgacggg
ctcgacacgcaggagatcggcaaggcgctcaaccgcgagggcatcgccgtacgagccggc
catcactgcgcgcagccgatcctgcggcgcttcggggtggaggcgacggtgcgggcctcg
ctcgcgctctacaacacccatgacgacgtcgatgccctggttgccgcggtgcgccggatc
cgcaccggcatcaccggcctcggctga
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