Rhodovastum atsumiense: RHOA_4139
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Entry
RHOA_4139 CDS
T08162
Symbol
soxR
Name
(GenBank) DNA-binding transcriptional dual regulator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rap03000
]
RHOA_4139 (soxR)
Transcription factors [BR:
rap03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RHOA_4139 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
HTH_IclR
NinG
TetR_N
Motif
Other DBs
NCBI-ProteinID:
CAH2602793
LinkDB
All DBs
Position
RHOA:4295253..4295681
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AA seq
142 aa
AA seq
DB search
MLSVGEVARRSGVAVSTLHFYEAKGLIAASRSGGNQRRYARDILRRIAIIRVAQRLGVSL
TEIAGLLKPIPAGKTPTAADVREMVASWRTALQERIDGLTRLRDHLDGCIGCGCLSLEDC
PLRNPSDRLGEEGRGPVLLQRP
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggtgggcgaggtggcgcggcgcagcggggttgccgtttccacgctgcatttc
tacgaggcgaaggggctgatcgcggccagccgcagtggcggcaaccagcgccgttacgcg
cgcgacatcctgcggcggatcgccatcatccgggtggcgcaacggctgggcgtctcgctg
accgagatcgccgggctgctgaagccgatcccggccgggaagaccccgacggcggcggat
gtgcgggagatggtcgcctcctggcggacggcgctgcaggagcgcatcgacgggctgacc
cggttgcgcgaccacctggacggctgcatcggctgcggctgcctctcgctggaggactgc
ccgttgcgcaacccctccgaccggctgggtgaggagggcagggggccggtgttgctgcaa
cgtccctga
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