Rhodovastum atsumiense: RHOA_4202
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Entry
RHOA_4202 CDS
T08162
Name
(GenBank) Sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rap03000
]
RHOA_4202
Transcription factors [BR:
rap03000
]
Prokaryotic type
Helix-turn-helix
Other families
RHOA_4202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
HTH_30
AAA_2
Mg_chelatase
HTH_1
HTH_23
HTH_IclR
HTH_28
AAA_5
HTH_psq
HTH_50
HTH_29
HTH_7
HTH_Tnp_ISL3
HVO_A0261_N
AAA
NACHT
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CAH2602881
LinkDB
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Position
RHOA:4367945..4369870
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AA seq
641 aa
AA seq
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MNERQLRLAWEAFMQGRHPPPALRPVVLESWRRSQQHRIQASRHHAPLLGEPELFRRRTA
GASLLQAARPALAKARTFLADANAMVLLTDAAGTIIEASGDPRVLEFGRRIHLQQGGLWT
EAAIGTNAIGTALASGEPVQIHAAEHFCDEVQRWTCAATPIHHPLDGQLLGILDISGPAS
SFHPQSLAHAVMAGQHIEAMLERAIRAEHDRLLQSLVRRRPDWLADELLAVDPRGIVVHA
TEHALPGLERLHPGLLQGRTLPALAGSPCEHWPELLARLLPGGTVELVQHEGRALGAVLV
LRSRRRPPAASTAPAAAARPEAAGFEAILGQSPALRAVIERARRFAASDAPVLIEGETGV
GKELFARAIHQDSAARRGAFVPINCGGLPRELIASELFGYAEGAFTGARSKGHAGRIEAA
QDGLLCLDEIGEMPLELQAFLLRVLEDGVVYPIGSNEGRKVRVRIVSMTNRNLAAEVAAG
RFRQDLYYRLATLRLAIPPLRERRDDVPALAVHYCRLAAARLGRPAPELGEDALALLRDY
WWPGNVRQLRNVIEAMVVAAEHPCLGAGDVPTELLPGTALDAPAPMPGPEAAPASLKATE
RAAILAAVRACHGNLTRAARQLGIARSTLYRRLQELGLEAD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcgccagcttcgcctggcctgggaagccttcatgcaggggcggcacccgccg
cccgcgctgcggccggtggtgcttgagtcctggcggcgctctcagcagcaccgcatccag
gccagccgccaccacgccccgctgctcggcgaacccgagctgttccgccgccgcaccgcc
ggggcgagcctgctgcaggcggcccgcccggcgctcgccaaggcccgtacctttctggcc
gatgccaacgccatggtgctgctgaccgacgccgccggcaccatcatcgaggccagcggc
gatccgcgtgtgctggagttcggccggcgcatccacctgcagcagggcgggctgtggacc
gaggccgccatcggcaccaacgccatcggcaccgccctggcctccggcgaaccagtgcag
atccacgccgccgagcatttctgcgacgaggtgcagcgctggacctgcgccgccaccccg
atccaccacccgctcgacgggcagttgctgggcatcctcgacatctccggcccggccagt
tccttccacccgcagagcctggcgcatgcggtgatggccgggcagcacatcgaggcgatg
ctggaacgcgccatccgcgccgagcatgaccggctgctgcagagcctggtgcggcggcgc
ccggactggctggccgacgaattgctggccgtcgatccacgcggtatcgtcgtgcatgcc
accgaacacgccctgccggggctggagcggctgcatcccggcctgctgcaggggcgcacc
ctgccggcgctggcgggatcgccctgcgagcactggccggagctgttggcgcggctgctg
ccggggggaacggtggagctggtgcagcacgagggccgggcactgggcgcggtgctggtg
ctgcgtagccgccgtcgcccgcccgccgcctccaccgcccccgccgcagccgcccggccg
gaggcggcgggcttcgaggcgatcctcggccagagcccggcgctgcgcgcggtgatcgag
cgcgcccgccgcttcgccgcttccgacgcgccggtgctgatcgagggcgagaccggggtt
ggcaaggaactgttcgcccgcgccatccaccaggacagcgccgcccgtcgcggcgccttc
gtgccgatcaattgcggcggcctgccgcgcgagctgatcgccagcgaattgttcggctat
gcggagggcgccttcaccggcgcgcgcagcaagggccatgccggccgcatcgaggcggcg
caggacgggttgctgtgtctggacgagatcggcgagatgccgctggaactgcaggccttc
ctgttgcgcgtgctggaggatggcgtcgtctatccgatcggcagcaacgaggggcgcaag
gtacgggtgcgcatcgtctccatgaccaaccgcaaccttgccgccgaggtggcggcgggg
cggttccgccaggacctgtattaccggctggcaacgctgcggctggcgatcccgccgctg
cgcgagcggcgcgacgatgtgccggcgctggccgtgcattattgccggctggcggcggcg
cggctgggacggccggcgccggagctgggcgaggacgcgctggcgttgctgcgggattat
tggtggccgggcaatgtgcggcagttgcgcaacgtgatcgaggccatggtggtggccgcc
gagcatccctgccttggcgccggcgacgtgccgaccgaattgctgcccggcactgcgctg
gatgcgccggcgccgatgcccggaccggaagcggcgcccgccagcctgaaggcgaccgag
cgcgccgccattctcgcggcggtgcgggcctgccatggcaacctcacccgcgccgcgcgg
caactggggatcgcgcggtcgacgctgtaccggcggctgcaggaactcgggctggaagcg
gattga
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