Rhodovastum atsumiense: RHOA_4226
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Entry
RHOA_4226 CDS
T08162
Name
(GenBank) TonB-dependent receptor plug domain-containing protein
KO
K02014
iron complex outermembrane recepter protein
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_4226
Transporters [BR:
rap02000
]
Other transporters
Pores ion channels [TC:
1
]
RHOA_4226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CAH2602905
LinkDB
All DBs
Position
RHOA:4404046..4406040
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AA seq
664 aa
AA seq
DB search
MRAPLLLAALLVLTGAPGLAAAQGLDRSALEQLFGEPVTTSATGKPQRASDVPVAMDIIT
AAQIRRSGAHDIPGVLARYTTLDVMRFTPDDYAVGVRGYATPNVPRLLVLVDGRQVYLDD
YGRTLWSAIPVQLSEIRQIEVVRGPNSALFGFNAAAGVINIVTWDPGYDRVNTVVLRGGS
GAYGELSGVATTPLPGNGGLRISTGLRRQDRFAHGYASADDRVDPANAQVASTATFGLGG
AVRAGLDASYVTTRTGQVDTNFISRNQAEVWSLRGRITADTGQGLIDASVYHNGFGYRIA
GTPAWQQGTTVIELSDTIKVGAAHTLRPFVQYRRNELQESAAWTFAGGLVSGSPVGVGYQ
VASVGGMWNWALADSLESTVALRYDRLWLHGRGYDGPGQPFSDADYNRRGFGTLAWNAAL
VWKPGPLDSVRLSAARGIQPPTLLDLGMRVNFGSFVSGGSPFAPTTVVDDYEIGYRRRLE
RLATDLDLTAFTQANRALSSTLDGQALVLPPAVAVPTLVPVSLGTSHVAGVEVGVTTHPG
PQLEVGLKYRGAFTSGRLMPAYIEYQRASPRHIATAHVGWTHGNWEADLFARYGSSAAGY
RMSATGIALVTVKDCVSASARVAYRITPKLIVALEGDDVLQARQAQGIGTLVERRVYLSL
RADF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcccccctgctgctcgccgccctgctggtcctcaccggcgcgcccggcctcgcc
gccgcccaggggctcgaccgcagcgcgctggagcaattgttcggcgagccggtcaccacc
agcgccaccggcaagccgcagcgcgcctccgacgtgccggtggccatggacatcatcacc
gccgcgcagatccgccgctccggcgcgcacgacatccccggcgtgctggcgcggtacacc
acgctcgatgtcatgcgcttcaccccggacgattatgcggtcggggtgcgcggctacgcc
acgccgaacgtgccgcggctgctggtgctggtggacgggcggcaggtctacctggacgat
tacggccgcaccctgtggtcggcgattccggtgcagctttcggagatccggcagatcgag
gtggtgcgcgggccgaacagcgccctgttcggtttcaacgccgccgccggcgtgatcaac
atcgtcacctgggatcccggctatgaccgggtgaacaccgtcgttctgcgcggcggcagc
ggcgcctatggcgagctgtcgggcgtggccacgacgccgctgccgggcaacgggggattg
cgcatctccaccgggctgcggcggcaggaccggttcgcgcacggctatgcatccgccgat
gaccgcgtcgatcccgccaatgcgcaggtggcgagcacggccacgttcggcctgggcggg
gctgtccgggccgggctcgacgccagctacgtcactacccggacgggacaggtggacacc
aatttcatcagccgcaaccaggcggaggtctggagcctgcgcgggcgcatcaccgccgat
acggggcaggggctgatcgacgcctcggtctaccacaacggcttcggctaccggatcgcc
ggcaccccggcctggcagcagggcaccaccgtgatcgagctgagcgacacgatcaaggtg
ggggctgcgcatacgctgcggcccttcgtgcagtaccggcgcaacgagctgcaggaaagc
gccgcctggaccttcgccggcggcctggtgtccggcagcccggtcggggtcggctaccag
gtcgcctcggtcggcggcatgtggaactgggcgctcgccgacagcctcgaatcgacggtg
gcgttgcgctacgaccggctctggctgcacggccgcggatatgacgggccgggccagccg
ttttcggatgccgactacaaccggcgcggcttcggcacgctggcatggaatgccgcgctg
gtctggaagccgggcccgctggacagcgtgcgcctgtcggccgcacgcggcatccagcca
ccgacgctgctggatctgggcatgcgggtgaatttcgggagcttcgtctcgggcggctcg
cccttcgcgccgaccacggtggtggacgactacgagatcggctatcgccgccgcctggaa
cggctcgcgaccgatctggacctgacggcgttcacccaggccaaccgtgccctgagcagc
acgctcgacggacaggcactcgtgctgccgcctgccgtcgccgtgccgaccctcgtgccc
gtcagcctcggcacctcccatgtcgcgggtgtggaagtcggggtcacgacgcatcccggc
ccgcagctggaggtcgggctgaaatatcggggcgcctttacctctggccgcctgatgccg
gcctatatcgagtaccagcgcgcatcgccccgccacatcgccaccgcgcatgtcggctgg
acgcacgggaactgggaggctgacctgttcgcgcgctatggcagctcggccgccggctac
cgcatgtcggcgacgggaatcgccctggtgacggtgaaggattgcgtctccgcctcggcc
cgcgtcgcctatcgcatcacgccgaagctgatcgtggcgctggaaggcgacgacgtgctg
caggcgcgccaggcgcagggcatcggcaccctggtcgaacgccgcgtctacctgtcgctg
cgcgccgatttctga
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