Rhodovastum atsumiense: RHOA_4366
Help
Entry
RHOA_4366 CDS
T08162
Name
(GenBank) Coenzyme F420-reducing hydrogenase, beta subunit
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00680
Methane metabolism
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RHOA_4366
Enzymes [BR:
rap01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
RHOA_4366
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
RHOA_4366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_2
Fer4_17
Fer4_9
Fer4_7
Fer4_8
Fer4
Fer4_10
Fer4_6
Fer4_18
Fer4_21
Fer4_4
Fer4_3
DUF7130
Motif
Other DBs
NCBI-ProteinID:
CAH2603048
LinkDB
All DBs
Position
RHOA:4543892..4544926
Genome browser
AA seq
344 aa
AA seq
DB search
MIAPQAIRACARDLLQSGKARTVLGYRRGTAGCLAEPAFMTSPEETATLVFDPTCVGNLA
LYLVNEKKRIRQARQSCGLPLGIVAKGCDSRAITVLLQENYIKRGEVIVLGVSCGAGGMV
DMRKLGRTLHGKTATAVHFDGPRGVTVSYADGSATLPAKEVLADRCLECTRAYPLDADFL
FGEKIDERPYGPRFAAVTAFASKSREERSAYWNAHFERCIRCYACRAVCPMCYCDECVVD
STSFIIGPTTTADDKANRVSWINRSATPSENAMYHMVRSMHLAGRCTDCGECERVCPMNI
PLRLLNTMLEREAYEAFQYAPGLDADLASLISSFRDGDPDDFVR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaccccaagccatcagggcatgcgccagggatctcctgcagagcggaaaggcg
cgcaccgtgctcggttatcggcgtggcaccgcgggatgcctggccgaaccggctttcatg
acctcccctgaggagacggcgacgctcgtctttgatccgacttgcgtcgggaacctcgcg
ctttacctcgtgaacgagaagaagcggataaggcaggcgcggcaatcctgcggactgccg
ctcggtattgtagccaaaggctgcgacagccgcgccatcactgttctgcttcaggaaaat
tatatcaagcggggcgaggtgattgtgctcggtgtctcctgtggggctggtggcatggtg
gacatgcgcaagcttggccggacgctgcacggaaagacggccacggcagtgcattttgat
ggcccccgtggcgtaacggtctcatacgccgacggcagtgccactttgcccgcaaaggaa
gtgctcgccgaccgctgtcttgaatgcaccagggcttatccactcgacgccgattttctg
tttggcgagaagatcgatgagcgcccttacggtccccgcttcgcggcggtcacggctttc
gcgagcaaaagcagggaagagcgctcggcatactggaacgctcattttgagcgttgcatc
cggtgctacgcctgccgcgccgtctgccctatgtgttattgcgacgaatgtgtcgtcgat
agcacgagctttatcatcggcccaacgacaacggccgacgataaagccaatcgcgtttcc
tggatcaaccgttctgcgaccccgtccgaaaacgcgatgtaccatatggtacgctccatg
cacctcgcaggtcgctgcaccgattgcggcgaatgcgagcgtgtatgtccaatgaacatt
ccgctccgcctgcttaacaccatgctcgaacgcgaagcctacgaagcatttcaatacgcg
cccggactcgacgcggatctggcttcgctcatctcgtccttccgtgacggcgatcccgat
gatttcgtgagatag
DBGET
integrated database retrieval system
