Rhodovastum atsumiense: RHOA_4474
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Entry
RHOA_4474 CDS
T08162
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_4474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_4474
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHOA_4474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAH2603185
LinkDB
All DBs
Position
RHOA:4648078..4649775
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AA seq
565 aa
AA seq
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MIPAPLRGWGALLPCLLFLAVWFLYPVGELLALGLRTPDGGWGLENFRRIADTPAFLAVL
GVTFRIALWTTLLSLLGAYPLAHAIAVAPARPGQRLLFCVLLAFWTSFLVRSLAWVIVLG
RYGPVNQALLAAGITEVPLRLLYNLGAALAGMVQVQVPLAVLTMLPVMRRIDPGLLRAAN
VLGAGPAQRFWRVWLPLSLPGVAAAALLVFVSSLGFFIMTALLGGARETMVSQVIITQLQ
ELLNWPFAAALSVVLLLTTLGVVVAFNRLTGTDALSDQPGRGGRAGSGVVARALCGGLGD
LCARLPDWPRLGGWLRHGAVLALLGFLLLPMLALLAASVSSGPVLQVPPQGFSLRWYTAY
LASPVWLTATLNSLSLATVAALIALLLGGAAALALVRFPLPGRGLVLAVILSPMIVPRII
IAVALFYLYGRIGLVGSWLGLALGHVVLALPFVVVTLMATLAAHDVRLDQAAATLGAPPW
RVLRHVTLPLIRGGVVSAFLFAFITSFDDLTIALFVNGGALTTLPRQMWNDMLMQAGPTL
AAVSCLLLGVVTLVLLAVGVSLRRG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgcgccgttgcgcggctggggcgcgctgctgccctgcctgctgttcctggcc
gtgtggttcctctatccggtcggcgagttgctggcactggggctgcgtacgccggatggc
ggctggggactggagaatttccggcgcatcgccgatacgccggccttcctcgcggtgctg
ggcgtgacgttccggatcgcgctgtggaccacgctgctgagcctgctgggcgcctatccg
ctggcgcatgccatcgccgtggcaccggcgcggccgggacagcgtttgctgttctgcgtg
ctgctggcattctggaccagcttcctggtgcgcagcctcgcctgggtgatcgtgctcggg
cgctacgggccggtgaaccaggcgctgctggccgccggcatcaccgaggtgccgctgcgg
ctgctgtacaacctcggcgcggcgctggccggcatggtgcaggtgcaggtgccgctggcg
gtgctgaccatgctgccggtgatgcgccggatcgatcccggcctgctgcgcgccgccaac
gtactgggcgccggcccggcacagcgcttctggcgcgtgtggctgccgctgtcgctgccc
ggcgtcgccgcggcggcgctgctggtgttcgtctcctcgctcgggttcttcatcatgacc
gcgctgctcggcggcgcgcgcgagaccatggtcagccaggtgatcatcacccagttgcag
gaattgctgaactggccgttcgccgcggcgctgtcggtggtgctgctgctgaccacgctg
ggcgtggtggtcgcgttcaaccgcctgaccggcacggatgcgctgagcgaccagcccggg
cgcggcgggcgggcgggcagcggcgtggtggcgcgggcgctgtgcggggggctgggcgat
ctgtgcgcgcggctgccggactggccgcggctggggggctggctgcggcacggcgcggtg
ctggcgctgctgggcttcctgctgctgccgatgctggcgctgctggccgcctcggtgtcg
tcggggccggtgctgcaggtgccgccgcaggggttctcgctgcgctggtacaccgcttac
cttgcgtccccggtgtggctgacggcgacactgaactcgctgagcctcgccaccgtggcc
gcgctgatcgccctgctgctcggcggggccgcggcgctggcgctggtgcgtttcccgctg
cccggccgcggcctggtgctggcggtgatcctctcgccgatgatcgtgccgcgcatcatc
atcgcggtggcgctgttctacctgtacggccgcatcgggctggtgggaagctggcttggg
ctggcgctggggcatgtggtactggcattgccgttcgtcgtggtgacgctgatggcgacg
cttgcggcacatgatgtccggcttgaccaggcggcggcgacgctgggggcaccgccctgg
cgggtgctgcgccacgtgaccctgccactgatccgcggcggggtggtctcggctttcctc
ttcgccttcatcacctccttcgacgacctgaccatcgcactgttcgtcaacggcggcgcc
ctcaccacgctgccgcggcagatgtggaacgacatgctgatgcaggccggaccgacgctt
gcggcggtgtcctgtttgctgctcggcgtggtcacgctggtgctgctggcggtcggggtg
agcctgcgacggggctga
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