Rhodovastum atsumiense: RHOA_4493
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Entry
RHOA_4493 CDS
T08162
Name
(GenBank) Pectate_lyase_3 domain-containing protein
Organism
rap
Rhodovastum atsumiense
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
CAH2603204
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Position
RHOA:4666947..4669580
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AA seq
877 aa
AA seq
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MRRLILAVPLALLPAAAGAGEITTSLDQLTIHGANSTGEVPNLTVDGTSLRTTTERAATA
APAAALSAEQARAQAAEAAAVQRAANLGDLADTAAARANLGLGGAARLNVGTSAGTVAAG
DDSRITGAATASALASEKTRAQAAETAASNAAAAAQAKANAALPATGGTLTGTISGGALS
GTDAGAAAVTATGATAARTMAARAADVVNVKDFGARCDGSTDDAAAIQSAIMALRARTYS
NAGIGVSARLVFPGGACVVRSTLDLTNLSTFGTLIDGAGTTLFGATAGAPVINALGMQNV
TVRDLSVYGSSLSTPTIGIQIGLSGNGKPADSNRFDNIHVTGSFSLAAFYNYSSEVTSFA
HVYFHNTYAGNNCYAFIEDGTNHFGVSPSMPADGVNSFNENLVENSWVSASGGCTPLWIS
GSGRHRWISSYISNFSGSGYGAVLWTGGTGNRQLDMDVHFETSPSDTFLISGPDPTPTLI
GFRYRDHINQATNSIFKLDTNITSASLVGGSLEIGQFLNPGVVVFADSARWSSNQDVYLP
GSNYWNLSKNFNGTLRIGGTTYFSGTLSNASLPSPLVASQIISTGSVTGVTVQSSNKGGY
KLSPPSVTIAPPPDGGSQATAYVSKVSIYGATPTIVSGGSGYTGADITLASPNCTTQPAF
HVVQSGGVVTQLTGSGTGLCSPAVMQETATPTTGGGGTGLVVNLTSVLWGVNGVTVGGAG
GGYSVPPAVTFSAGAPTAVGTATLGASFTAASSAGQVLLNSNGTVLGVAGSSGAPVLSVG
ALIDNSGVRQSLGSSYTVPANTSLVRFTQSSTVAASTVTLPAPLADGQSIQFVNYAGAIT
ALTFSPAVNGWTNGTTLAAYTGLRIRWDATAGSWYRE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcctgatcctggccgttcctctcgccctgctgccggccgccgccggcgcgggc
gagatcaccaccagtctcgaccagttgacgatccacggtgccaacagcacgggcgaggtg
ccgaacctcacggtggacggcacctcgctgcgcaccacgacggagcgcgcggcgacagcg
gcgccggccgcggcgctgtcggccgaacaggcgcgggcacaggcggccgaggcggctgcg
gtgcagcgggcggcgaatctcggcgacttggccgatactgcggcggcgcgggccaatctc
ggcctgggcggcgcggcgcggctgaacgtcggcaccagcgccggcaccgtcgcggccggt
gatgattcccgcatcaccggggcggccacggcctcggccctcgccagcgaaaagacgcgg
gcgcaggcggccgagacggcggcatccaacgcggcggcggcggcgcaggcgaaggcgaat
gccgcgctgccggcgacgggcggaacgctcactggcaccatctcgggcggggcgctgtcg
gggaccgacgcaggtgccgccgcggtgacggcgaccggcgcgacggcggcacggacaatg
gccgcgcgtgcggcggatgtcgtcaacgtcaaggatttcggcgccaggtgcgatggaagc
accgatgacgcagcggcgatccagtccgcaatcatggcactgcgggcacgaacctacagc
aacgccggaatcggcgtttccgcccggttggtctttccgggcggagcttgcgtggtgcgc
tcgacgctcgacctgacgaacctgtcgacgttcggcacgctgatcgacggcgccggcacc
acgctgttcggcgccactgccggggcgcccgtgatcaacgcactcggcatgcagaacgtt
accgtccgtgatctgtcggtttacggcagttcgctcagcacgccgacaatcggcatccag
atcggcctgtctggcaacgggaagcccgccgacagcaaccgattcgacaacatccacgtc
accggcagcttttctctggcggcgttctataattattcatcagaggtgaccagcttcgcg
catgtatatttccacaacacgtatgctgggaacaattgttacgcattcatcgaggatggc
acgaaccacttcggcgtctcgccgtcgatgccggccgatggagtgaacagttttaacgaa
aatctcgttgagaacagttgggtatcagcgtcgggcgggtgcacgccgctgtggatttcc
gggtcgggacggcatcgctggatcagcagctacatctccaacttctcgggcagtgggtac
ggcgccgtgctgtggaccggcggcaccggcaacagacaacttgacatggatgtccatttc
gaaacatccccgagcgacactttcctgatttcggggccggatccgacgccgaccctgatc
gggttccgttaccgcgatcacatcaaccaggcgacgaacagcatcttcaagctggatacc
aacattacttcggcatctctggttggcggctcgctcgaaatcggccagttcctgaatcca
ggcgtggtggtgttcgccgattctgcgcggtggagcagcaaccaggatgtgtatctgccc
ggcagcaactactggaacctgtcgaagaacttcaacggcaccctgcgcatcggcggaacg
acgtatttttccggcacgttgtcgaacgcgtcgctgccgtcgccgctggtcgcgagccag
atcatatcgacaggttcggtgaccggtgtgacggtgcagagcagcaacaaggggggctac
aagctgtcgccgccctcggtgaccatcgcgcctccgcctgacggcggatcccaggccaca
gcctacgtatcgaaagtatcgatatatggagccacgccgaccatcgtgtccggcggttcc
ggctataccggagccgacatcacgctggcttcaccgaactgcacgacacaacctgcattt
cacgttgtgcaaagcggcggcgttgtcacccagttgacgggctccggtaccggattatgc
agccctgcggtcatgcaggaaaccgcgacacccaccacaggcgggggcggcacgggattg
gtcgtcaacctgacatcggtgttgtggggcgtgaacggcgtgacggtgggaggcgctggc
ggcggctattctgttcccccggccgtcaccttctccgcaggggctcccactgcggtcgga
acggcgacgctcggcgccagcttcacggcggcgagttcggccgggcaggtgctgttgaac
agcaacggaaccgtactgggagtcgccggcagttccggagcgccagtactttcggtcggt
gccttgatcgacaacagcggcgtgcgacagtctcttggttccagctacaccgttcccgcc
aacacgtcgctggtccgcttcacccagagcagcactgtcgctgcttccactgtgacgctg
cccgcgccgctggcggatggtcagagcattcagttcgtgaactacgccggagcgatcacc
gccctgaccttctcacccgcggtcaacggctggacgaacggcaccacacttgcggcctat
accggcctgcgcatccgctgggatgcgacggcggggagctggtatcgcgagtaa
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