Rhodovastum atsumiense: RHOA_4727
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Entry
RHOA_4727 CDS
T08162
Name
(GenBank) transposase
Organism
rap
Rhodovastum atsumiense
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_10
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
CAH2603457
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Position
RHOA:complement(4872403..4873938)
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AA seq
511 aa
AA seq
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MPGQRLPMRQVREVLRLKHVCGQSGHRIAAAVGISRYTVAEYLRRATVVGITWPVPPELD
DAALERKLFTPPFVAEPTRPQPEWTRIHAELRRPGVTLLLLWEEYRAGQPDGYGYSRFCD
LYAEWRGRLSPTMRQAHPAGERLFVDYAGQTVAVIDAATGATRAAQIFVAALGASNLVYA
EARWSQGLADWIGCHVNTFAAFGGVTRQIVCDNLKAGVTAACRYEPGINRSYAEMAAHYG
TAVVPARVRRPRDKAKVEVAVQVVQRWILARLRHRRFFSLADLNGAIRDLVTDLNARPMR
HLGISRQALFERLERAVLLPLPAEPYAYAEWHRCRAGLDYHIELHGHFYSVPYRLARTVI
EARVTEATVELFHGGTRVASHARSPQCPGQTTTPGHMPSAHRRHAEWTPTRLLQEAAAIG
PATAELIKALLADKPHPEQGFRAGLGILRLVRGYGPTRVEAACRRGLDIGARSYGSVQSI
LRNNLDRLPTQSASEEKPQLHSNIRGSRYYH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccagagactgccgatgcgtcaggttcgagaagttcttcgtctcaagcacgtt
tgcggccagagtggtcaccggattgccgcggcggtcggtatcagccgctacacggtggcc
gagtatctgcgccgggccacggtggtcgggatcacctggccggtgccgcccgaactcgac
gacgcggcactggaacgcaagctgttcaccccacctttcgtggcggagccaacgcgcccg
caaccggaatggacgcggatccacgcggagctgcgtcgtcccggagtgacgctgcttctg
ctctgggaggaataccgggccgggcaaccggatgggtatggctacagccgcttttgcgac
ctctatgccgagtggcgggggcggctgtcgccgacgatgcgtcaggcccaccctgctggc
gagcgactgtttgtcgactacgccgggcagacggtggcggtgatcgacgcggccaccggg
gcgacgcgggccgcgcagatcttcgtcgccgccctcggcgcgtccaacctggtctatgcc
gaagcacgctggagccaggggctggcggattggattggctgccacgtcaatacctttgcc
gccttcggcggggtcacccgccagatcgtctgcgacaacctcaaggccggcgtcaccgcc
gcctgccgctacgagccggggatcaaccgtagctacgcggagatggccgcccactacggc
accgccgtcgtgccggcgcgggtgcgtcggccacgcgacaaggccaaggtcgaagtggct
gtccaggtcgtgcaacggtggatcctggcccggctgcggcaccggcggttcttctctctg
gcggacctgaacggcgcgatccgggacctggtcaccgacctcaacgcccggccgatgcgc
catctcggcatcagccggcaggccctgttcgagcgtctcgagcgcgccgtcctattgccg
ctgccggcggagccctatgcctatgccgagtggcatcgctgccgggccgggctcgactac
cacattgagttgcatgggcatttctactccgtaccttaccgcttggcgcggacggtgatc
gaagcccgggtcaccgaggcaacggtcgagctattccatggcggcacgcgggtggccagc
cacgcgcgcagcccgcagtgcccaggtcagaccacgacgcctggccatatgccgagcgca
caccgacgccatgccgagtggacgccgacccggctgctgcaggaagccgccgcgatcggc
cccgccacggccgaactgatcaaggccctgctcgccgacaagccccatcccgagcagggg
ttccgggccgggttgggcatcctgcgcctggtgcgcggctacgggcccacccgtgtcgag
gcggcttgtcggcgcggattggacatcggcgcccgctcctacggctcggtgcagtcgatc
ctacgcaacaacctcgaccgcctgccgacgcagtccgcgtcggaggaaaagccgcagctg
cacagcaacattcgcggcagccgctattaccactga
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