Rhodovastum atsumiense: RHOA_4895
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Entry
RHOA_4895 CDS
T08162
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap03030
DNA replication
rap03430
Mismatch repair
rap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHOA_4895
03430 Mismatch repair
RHOA_4895
03440 Homologous recombination
RHOA_4895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rap03032
]
RHOA_4895
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_4895
Enzymes [BR:
rap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHOA_4895
DNA replication proteins [BR:
rap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHOA_4895
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHOA_4895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS
PAS_4
DNA_pol_A_exo1
PAS_7
Motif
Other DBs
NCBI-ProteinID:
CAH2603628
LinkDB
All DBs
Position
RHOA:5033691..5035739
Genome browser
AA seq
682 aa
AA seq
DB search
MARHPAGVAASLRRVLIPLACCAGAAGFAGRWGAPPEAVAAAAAGCVLLAWLALELWLGR
PLDRLARALLVAARDDPRHAPPSAGRLAARLGEATAALQARLAAAEAAREAALAAATARV
EEQKRRLEAILLDLSEGVVVCARDHQVLLYNQVAAELVDASQSLGLGRPVTEVLSRAPLD
HHLERLERRPEAGRAERFVCATQGAARLLQARMALTTDAAGAPTGYVLTLSDTGAEIDRA
ARLERTLRAGLERQNGLLASLRAAVETLAEVPELEAGQRHAFERVLLEDSLQLSEQNAAL
ATALEELGGRSWPMAEIGTADLFALLARRMAQAAPPVRVVPAGLPDWVLADSLALADLLE
HLAALLARECGVDYLTAAVAREHGRVCLDLVWSGAPVPAGLLEAWLDIPFGDAATTARAV
LERHATDCWSQPAGPGEALIRIPLPSAAEPGLVPRRPRAMRPEFYDFDLAGRPAVTDALR
ERRLRELSYVVFDVETTGLALSKGDEVVSIGAVRVVNGRVLPLETFERIVNPGRPIPPDS
VRFHGVTDADVADKPPLAVVLPQFRRFAGDAVLVAHNAAFDMMAIGRGADACGLRFDNPV
LDTLLISAWLDPEEDDHSLDGICARMGFEVIGRHTALADSLTAAAILVRQFERLEARGID
RFGKLAVAIDLSARLRQNRMAF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccatccggccggagtggccgcctcgctgcggcgtgtcctgatcccgctggcc
tgctgcgcgggtgccgccggcttcgcggggcgctggggcgcaccgccggaagccgtcgcc
gccgccgccgccggttgcgtgctgctggcctggctggcgctggaactctggctcggccgc
ccgctcgaccggctggcgcgggctttgctggtcgccgcccgcgacgatccccggcacgcc
ccgccgtccgccggccgcttggcggcgcggctgggcgaggccacggcggcgctgcaggcc
cggctcgctgccgccgaggcggcccgcgaggcggcgctggccgccgccaccgcccgcgtc
gaggagcagaagcgccggctggaggcgattctcctcgacctctccgaaggcgtggttgtc
tgtgcccgcgaccatcaggtgttgctgtataatcaggtcgcggccgagctggtcgatgcc
tcgcagtctttgggcctgggccgcccggtcaccgaggtgctgtcgcgcgccccgctcgac
caccacctggaacggctggagcggcggccggaggcgggccgggccgagcgcttcgtctgc
gccacccagggcgcggcgcggctgctgcaggcgcgcatggcgctgaccaccgatgccgcc
ggtgccccgaccggctacgtgctgacgctcagcgacaccggggcggagatcgaccgggcg
gcgcggctggagcggacgctgcgggccgggctcgaacggcagaacggcctgctggccagc
ttgcgcgccgcggtcgagacgctcgccgaggtgccggaactggaggccgggcagcgccat
gccttcgagcgggtgctgctggaggacagcctgcagctcagcgagcagaacgcggcgctg
gcgacggcgctggaggagctgggtgggcggagctggccgatggcggagatcggcaccgcc
gatctgttcgcgctgctggcccgccgcatggcgcaggcggcgccgccggtccgggtggtg
ccggccgggctgccggactgggtgttggccgacagcctcgcgctggccgatctgctggaa
cacctcgccgccctgctggcccgggaatgcggcgtcgactacctgaccgcggcggtggcg
cgcgagcatgggcgggtgtgcctcgatctggtgtggtccggcgcgccggtcccggccggg
ctgctggaagcctggctcgacattcccttcggcgacgccgccaccaccgcgcgggcggtg
ctggagcggcacgccaccgattgctggagccagccggccgggccgggcgaggcgctgatc
cgcatcccgctgccctcggccgccgaaccggggctcgtgccgcgccgtccgcgggcgatg
cgtccggaattctacgatttcgaccttgccggacggccggcggtgaccgatgccctgcgc
gagcggcggctgcgggagctgagctatgtcgtgttcgatgtcgaaaccaccgggctggcc
ttgtcgaagggcgacgaggtggtgtcgatcggcgccgtgcgcgtggtcaacgggcgggtg
ctgcccttggaaaccttcgagcgcatcgtcaatcccggccggccgatcccgccggactcg
gtgcggttccacggcgtgaccgatgcggacgtggcggacaagccgccgctggcggtggtg
ctgccgcagttccgccgcttcgccggcgatgccgtgctggtcgcccacaacgccgccttc
gacatgatggcgatcggccgtggcgccgatgcctgcggcctgcgcttcgacaacccggtg
ctggacacgctgctgatctcggcctggctcgatcccgaggaggacgaccattccctcgac
ggcatctgcgcgcgcatgggcttcgaggtgatcggccggcacaccgcgctggcggattcg
ctgaccgctgcggccatcctggtgcgccagttcgagcggctggaggcgcggggaatcgac
cgcttcggcaagctggcggtggcgatcgacctgtcggcgcggctgcgccagaaccggatg
gcgttctga
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