Rhodovastum atsumiense: RHOA_5058
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Entry
RHOA_5058 CDS
T08162
Name
(GenBank) Outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_5058
Transporters [BR:
rap02000
]
Other transporters
Pores ion channels [TC:
1
]
RHOA_5058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Surface_Ag_2
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
CAH2603802
LinkDB
All DBs
Position
RHOA:complement(5200905..5202020)
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AA seq
371 aa
AA seq
DB search
MKSLNSALLAGTILVALPMVARAEAISGLYIGAGVGANFLQNQTIKGVQLPGAPYAFAGS
NPKFDTGLATLGSVGWGFGNGLRVELEGNYRFNNLRSVGGIPGSPTGTEEKYGAMVNVLY
DIDIARYGLSFYNISPYVGAGVGWVHNRWSNVNVGSGAPGGTLLRINSQVDDIAYQAIAG
VAFPIEAVPGLAVTAEYRFYIEPNDRKYESQYFAPGTKLGPNTKVSDDLNHSVMIGVRYA
FNAAPPPPPPTPAPVVAPAPAPSRTYLVFFDWDRADLTGRARQIIAEAAQNSTRVQYTRI
EVAGHADLTGTPQYNQRLSLRRAQNVAGELVRNGVPQAAISIQAFGDSRPLVPTARGVRE
PQNRRVEIVLR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagcctgaacagcgccttgctggccggaacgattcttgttgccctcccgatggtg
gcccgggccgaagcgatcagcggcctttatatcggggccggcgtcggggccaattttctg
cagaaccagaccatcaagggggtgcaattgcccggcgccccgtacgccttcgccggcagc
aacccgaaattcgacaccggcctcgccaccctgggcagcgtcggctggggcttcggcaac
gggctgcgcgtcgaactggaaggcaattaccgattcaataacctgcgcagtgttggcggc
atcccgggcagccccaccggcaccgaagagaaatacggcgcgatggtcaacgtgctgtac
gacatcgacatcgcccggtacgggctgagtttctacaacatatccccctatgtcggcgcc
ggcgtcggctgggtgcacaaccgctggtccaacgtcaatgtcggctcgggcgcgcccggc
gggaccttgctgcggatcaacagccaggtggacgacatcgcctaccaggccatcgccggc
gtggccttcccgatcgaggcggtgcccggcctggcggtgacggcggaataccgcttctac
atcgagccgaacgaccgcaaatacgaaagccagtacttcgcccccggcaccaagctcggc
ccgaacaccaaggtctccgacgatctgaaccacagcgtcatgatcggcgtccgctacgcc
ttcaacgccgccccgccaccgccgccgccaacccccgccccggtggtcgcgccggccccc
gccccctcgcgcacctatctcgtgttcttcgactgggaccgggccgacctgaccggccgc
gcccgccagatcatcgccgaggccgcccagaactcgacgcgggtgcagtacacgcgaatc
gaggtggccggccacgcggacctgaccggcacgccgcaatacaaccagcgcctgtcgctg
cgccgtgcccagaacgtcgccggcgaactggtccgcaacggcgtgccgcaggccgccatc
tccatccaggccttcggcgacagccgcccgctggtgccgaccgcccgcggcgtgcgcgaa
ccacagaaccgccgggtcgaaatcgtcctgagataa
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