Rhodovastum atsumiense: RHOA_5166
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Entry
RHOA_5166 CDS
T08162
Name
(GenBank) ABC transporter permease
KO
K02033
peptide/nickel transport system permease protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_5166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_5166
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHOA_5166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
CAH2603918
LinkDB
All DBs
Position
RHOA:complement(5314918..5315877)
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AA seq
319 aa
AA seq
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MPPPPLARAGLRLAHSAVVLWAAFTLSFLILYVLPSDPVSIMLNQAEQSMAAAAQVAALR
AEYHLDQPLVVQYGLALWRALHLDFGRSIQSGQPVAALLAQAMPATAALAGAALSLALLT
GTAIALLASLAGGPARRLLHALPAVGISMPTFWVGLVLLEWLSFRLTLFPAMDDGGARAL
VLPAVTLAVPTAAVIAQVLGRSLAGVWRQPFIEAIRAKGLTRLRMLFVHVLPNAAVPLLT
MAGVIAGHLLAGAVVTETVFSREGIGRLAQGAVAAKDIPMVQGVVVLAAVVFVGVNLMVD
LLYPLLDPRIGLARRTGRP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcctccgctcgcccgcgccgggcttcgccttgctcattccgccgtggtgctg
tgggcggcgttcacgctgtccttcctgatcctgtacgtgctgccgagcgatccggtcagc
atcatgctgaatcaggccgagcagagcatggccgccgccgcgcaggtggcggcgctgcgc
gccgagtaccatctcgaccagcccctggtggtgcagtacgggctggcgctgtggcgggcg
ctgcacctggatttcggccgctcgatccagagcggccagccggtggcggcgctgctggca
caggcgatgccggccaccgccgcgctcgccggggcggcgctgtcgctggcgctgctgacg
ggcaccgcgattgccctgctggccagcctcgccgggggaccggcccggcggttgctgcac
gccttgccggcagtcggcatctccatgcccaccttctgggtcgggctggtgctgctggaa
tggctgtcgttccgcctgaccttgttcccggcgatggatgacggcggtgcgcgcgcgctg
gtgctgccggcggtgacgctggcggtgcccaccgcggcggtgatcgcgcaggtgctcggc
cgctcgctggccggggtctggcggcagcccttcatcgaggcgatccgcgccaaggggctg
acccggctgcgcatgctgttcgtgcacgtgctgcccaacgccgccgtgccgctgctgacc
atggccggggtgatcgccggccacctgctggccggggcggtggtcaccgaaacggtgttc
tcgcgcgaagggatcggccggctggcgcagggcgccgtcgccgccaaggacatcccgatg
gtgcagggcgtggtggtgctggcggcggtggtgttcgtcggcgtcaacctgatggtggac
ctgctctatccgctgctcgacccgcgcatcggcctggcgcgccggacgggacggccatga
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