Rhodovastum atsumiense: RHOA_5470
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Entry
RHOA_5470 CDS
T08162
Symbol
glgX
Name
(GenBank) Glycogen operon protein GlgX homolog
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00500
Starch and sucrose metabolism
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
Module
rap_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RHOA_5470 (glgX)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RHOA_5470 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
CAH2604228
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All DBs
Position
RHOA:complement(5618057..5620180)
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AA seq
707 aa
AA seq
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MPVPTTPKTRLSEGLPHPLGATWDGLGVNFALFSANATKVELCLFDDDGRRELQRIELPE
FTDEVWHGYLPEARPGTVYAYRVHGPYEPDSGHRFNHNKLLLDPYAKGLVGELRWDPAVF
GYTLESGDDLTFDTRDSARFVPKCRVIDPAFTWGHDARPNVPWERTIVYETHVRGFTRRH
PAVPEPLRGTFAGLAVAEVIDHIRRLGVTSVELLPVHAFINDSMLLDKGLTNYWGYNTIG
FFAPDVRYTATHAINEFKEMVAHLHAAGLEVILDVVYNHTAEGNERGPTLSFRGIDNASY
YRLLPDQRRYYINDTGTGNTLNLSHPRVLQMVTDSLRYWVTEMHVDGFRFDLATILGREP
YGFDEGGGFLDSCRQDPVLSSVKLIAEPWDIGPGGYQVGAFPPGWAEWNDRFRDTVRAFW
KGDSGSAAEMAARLCASGDLFNRRGRKPWASVNFVTAHDGFTLNDVVSYNEKHNAANGEN
NRDGHDHNRSWNHGTEGPTDDPDIRRLRERQKRNMLASVLLAQGTPMLLAGDELGRTQRG
NNNAYCQDNEISWVDWEIDADGHALIEFVRRLTGLRQQYPILRRGRFLTGEYNEELAVKD
VSWIAAGGSEMAQDDWTNPGTRCFGMLMDGRAQATGIRRPASDATLLWILNAHHDIVAFT
LPRVTGGRRWMTMFDTATPERMREHSHRIGETIDIVGRSMVLLALHA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtacccaccactcccaagacacgattgagcgaaggtctgccacatccgcttggc
gcaacatgggatgggcttggcgtcaacttcgcgttgttttcagccaatgccaccaaggtc
gaactctgcctgttcgacgacgacggacggcgcgagctgcagcggatcgaactgcccgag
ttcaccgacgaagtctggcatggctacctgccggaggcgcggccgggcacggtctacgcc
tatcgcgtgcacgggccgtacgaaccggattccggccaccgcttcaatcacaacaagctg
ttgctcgacccctacgccaagggcctggtgggcgagctgcgctgggatccggcggtgttc
ggctacacgctggaatccggcgacgacctgaccttcgacacccgcgacagcgcgcgcttc
gtgccgaaatgccgcgtcatcgacccggccttcacctggggacacgatgcgcggccgaac
gtgccgtgggaacgtacaatcgtatacgaaacgcatgtgcgcggcttcacccggcgccat
ccggccgtgcccgagccgctgcgtggcaccttcgcgggactcgcggtggccgaagtgatc
gaccacatccgccgactcggcgtcacctcggtcgagctgctgccggtacacgccttcatc
aacgacagcatgctgctggacaagggcctgaccaattactggggctacaacacgatcggc
ttcttcgcccccgatgtgcgctacaccgccacgcatgccatcaacgaattcaaggaaatg
gtggcgcacctgcacgccgccgggctcgaggtgatcctcgacgtcgtctacaaccacacc
gccgaaggcaatgaacgcggcccgacgctgagtttccgcggcatcgacaatgccagctac
taccggctgctgcccgaccagcggcgctactacatcaacgacaccggcaccgggaacacg
ttgaacctgtcgcatccgcgcgtgctgcagatggtgaccgacagcctgcgctactgggtc
accgagatgcacgtggacgggttccgtttcgatctggcgacaattctcggtcgcgagccc
tacggcttcgacgagggcggcggattcctcgattcctgccggcaggatccggtgctgtcc
tcggtcaagctgatcgccgagccctgggatatcgggccgggcggctaccaggtcggcgcc
ttcccgccgggctgggcggaatggaatgaccgcttccgcgacacggtgcgggccttctgg
aaaggcgacagcggcagcgcggcagagatggcggcccggctctgcgcctcgggcgacctg
ttcaaccggcgcggccgcaagccgtgggcgagcgtgaacttcgtcaccgcccatgacggg
ttcacgctgaacgacgttgtctcctacaacgaaaagcacaacgcggcgaacggcgagaac
aatcgcgacggccacgaccacaaccgctcctggaaccacggcacggaaggaccgacggac
gatccggacatccgtcgcctgcgcgagcggcagaaacgcaacatgctcgccagcgtgctg
ctggcgcagggcacgccgatgctgctcgccggcgacgagctcggccgcacccagcgcggc
aacaacaacgcctattgccaggacaacgagatctcctgggtggactgggaaatcgacgcg
gatggccatgcgctcatcgagttcgtgcgccggctgaccgggctgcgccagcaatatccc
atcctgcggcgcggccgcttcctgaccggcgaatacaacgaggaactcgccgtgaaggac
gtgagctggatcgccgccggtggcagcgaaatggcccaggacgactggaccaatccgggg
acgcgctgcttcgggatgctgatggatggccgcgcccaggccaccggcatccgccgcccg
gccagcgacgcgacgctgctgtggatcctgaatgcccaccacgacatcgtcgcctttacc
ctgccgcgggtgaccggcggacggcgctggatgaccatgttcgacaccgccaccccggag
cggatgcgcgagcacagtcatcgcatcggcgagacgatcgatatcgtcggccgctcgatg
gtgctgctggcactgcatgcctga
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