Rhodovastum atsumiense: RHOA_5559
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Entry
RHOA_5559 CDS
T08162
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00550
Peptidoglycan biosynthesis
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHOA_5559
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rap01002
]
RHOA_5559
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
RHOA_5559
Enzymes [BR:
rap01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RHOA_5559
Peptidases and inhibitors [BR:
rap01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RHOA_5559
Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RHOA_5559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CDPS
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CAH2604317
LinkDB
All DBs
Position
RHOA:5712312..5713559
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AA seq
415 aa
AA seq
DB search
MLSRRFLLAGAAVGLPSLAAAQTRPQHPAPRPPAPHPAGAAPGRGRRPAEPVPTGTPANT
PIGPLDTAARWAVVLDFATGATLLDKDADASMPPSSMTKLMTIYIVYSLLKSGRLQLTQE
LPVSERAWRMGGSKMFVGIGTQVKVEDLIRGVIVQSGNDACIVLAEAIAGSEEQFAELMN
QKGKEIGLQNSNFRNATGWPDPEHRMSVRDIAVLARRLIQDFPEYYHYDSEKAFKYNNIE
QQNRNPLVQKNLADGLKTGHTDDGGYGLVASAERSGRRIVLVVNGLNSMRQRAEEGERLL
EWAFREFENVTLFTADQPVEQVPVWLGTQPTVPLVGGRDLVVTMPRGWRNRAKITLEYDT
PVQAPVARGAQLGRLTVIGQGVPEMQVPLLAGADVPRLGLPGRAWAVLTHYVTGS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctcagccgtcgattcctgctggccggcgccgccgtcggcctgcccagccttgccgct
gcccagacgcggccccagcacccggcgccgcgcccgcccgcgccgcatcccgccggggcc
gcgcctggccggggccgccgccccgccgagcccgtgcccaccggcacgccggccaatacg
ccgatcgggccgctggacaccgccgcccggtgggcggtggtcctggatttcgccaccggg
gcgacgctgctcgacaaggacgcggatgcgagcatgccgccctcgtcgatgaccaagctg
atgacgatctacatcgtctacagcctgctgaaatcggggcggctgcaactgacccaggaa
ctgccggtctccgagcgcgcctggcgcatgggcggatcgaagatgttcgtcggcatcggc
acgcaggtgaaggtcgaggacctgatccgcggcgtgatcgtgcagtccggcaacgatgcc
tgcatcgtgctggccgaggcgatcgccggctcggaggaacagttcgccgagctgatgaac
cagaagggcaaggaaatcgggctgcagaacagcaatttccgtaacgccaccggctggccc
gaccccgagcaccgcatgagcgtgcgcgacatcgccgtcctcgcgcgccggctgatccag
gattttccggaatactaccattacgattccgaaaaagctttcaaatacaacaatatcgag
caacagaaccgcaatccgctggtgcagaagaacctcgccgacgggctcaagaccggccac
accgacgatggtggctacggcctggtggcaagcgccgagcgcagcgggcggcgcatcgtg
ctggtggtcaacggcctgaactcgatgcgccagcgcgccgaggaaggcgagcgactgctg
gaatgggcgttccgggaattcgagaacgtgaccctgttcactgccgaccagccggtggaa
caggtgccggtctggctcggcacccagccgacggtgccgctggtcggcgggcgcgacctg
gtggtcaccatgccgcggggctggcgcaaccgggcaaagatcaccctggaatatgacacg
ccggtgcaggcgccggtggcgcggggcgcccaactgggtcggttgacggtgatcgggcag
ggcgtgccggaaatgcaggtgccgctgctggcaggggccgatgtgccgcggctcgggctg
ccggggcgggcctgggcggtgctgacccactatgtgacgggtagctaa
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