Rhodovastum atsumiense: RHOA_5561
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Entry
RHOA_5561 CDS
T08162
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap03030
DNA replication
rap03430
Mismatch repair
rap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHOA_5561
03430 Mismatch repair
RHOA_5561
03440 Homologous recombination
RHOA_5561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rap03032
]
RHOA_5561
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_5561
Enzymes [BR:
rap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHOA_5561
DNA replication proteins [BR:
rap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHOA_5561
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHOA_5561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA_5
AAA
NACHT
nSTAND3
AAA_22
AAA_19
AAA_30
Mg_chelatase
NTPase_1
AAA_25
RuvB_N
AAA_24
ATPase
AAA_14
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CAH2604319
LinkDB
All DBs
Position
RHOA:5714337..5715356
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AA seq
339 aa
AA seq
DB search
MTLPEPRANPLLIGHAAAEAAMLEALRGGRLHHAWLITGPPGIGKATLAFRFARRLLAGG
EEALALPETHPTFRRVAAGTHADLLTIERAWDPKRKKLRGEIVADDVRAVSEFLRLTPAE
GGWRVVVLDGAEEMNRHAANALLKVLEEPPARAVLLLVSAAAGRLLPTIRSRCRRLRLSP
LAEEEVRDLLDRALPGTDAEERARLASMAEGSPGRALALAEGGGVALADLVSQVIERLPG
LGAGQAHEVADTVARDEDSFATFMDLLRGTVASAVRDAARGRADPDQARLLGARPLDAWV
EVWHALTRLQDETQAFYLDRRQAIVSGLGLLAGTAPRMS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgcccgagccccgcgccaacccgctcctgatcggccatgcagccgcggaagcg
gcgatgctggaggcgctgcggggcggccggctgcaccatgcctggctgatcaccggccca
cccggcatcggcaaggccaccctggccttccgcttcgcccgccggctgctcgccggcggc
gaggaggcactggcgctgccggagacccacccgaccttccgccgggtcgccgccggcacc
catgccgacctgctgaccatcgagcgcgcctgggaccccaagcgcaagaagctgcgcggc
gagatcgtcgccgacgacgtgcgcgcggtgagcgagttcctgcgcctcactccggccgag
ggcggctggcgggtggtggtgctggacggggcggaagagatgaaccgccacgccgccaac
gccctgctcaaggtgctggaggagccgccggcacgggcggtgttgctgctggtctccgcc
gccgccggccggttgctgccgaccatccgcagccgctgccgccgcctgcgcctctccccg
ctggccgaggaagaggtgcgggacctgctcgaccgggcgctgcccggcaccgacgccgag
gaacgggcgcggctggcatcgatggccgagggctcgcccggccgcgccttggccctggcc
gagggcggcggggtggcgctggccgatcttgtgtcccaggtgatcgaacggctgccgggc
ctcggcgccggccaggcgcacgaggtcgccgacacggtggcgcgggacgaggacagtttc
gccaccttcatggacctgctgcgcggcaccgtggcgagcgcggtgcgcgatgctgccagg
ggacgcgccgatcccgaccaggcaaggctgctcggcgcccggccccttgatgcctgggtg
gaggtgtggcacgcgctgacccgccttcaggatgagactcaggcgttttatctcgaccgg
cgccaagccatcgtctccggccttggcctgctggccggcactgccccgagaatgtcatga
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