Rhodovastum atsumiense: RHOA_5732
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Entry
RHOA_5732 CDS
T08162
Symbol
oppD
Name
(GenBank) murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_5732 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_5732 (oppD)
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHOA_5732 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
nSTAND1
BSH_CusB
Capsid_VP7
AAA_16
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAH2604527
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All DBs
Position
RHOA:complement(5898030..5899019)
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AA seq
329 aa
AA seq
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MEDHDPVLLIEDLRTEFRIGGTWRAAVDGVSLSLRRGETLALVGESGCGKSMTSLSIMGL
VPRPAGRIAGGRIVLEGRDIVPLPEHALEQLRGDRMAMIFQEPMTSLNPVMTIGEQVAEP
LRLHRGLSRAEAARRALAVLEEVKIPSAARRYHEYPHQFSGGMRQRVMIAVALACEPALL
LADEPTTALDVTIQAQVLGLLADLKARHGMAMLFITHNLGVVAQIADRVAVMYAGQIVEE
APVLEIFAAPRHPYTRALFAAIPRMDLDAQELAAIPGRVPPLDAMPQGCRFAPRCPLARA
GCEAPQALLPAGPEHRARCHLATKELAHA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcatgacccggtcctgctgatcgaggacctgcgaaccgagttccgcatcggc
ggcacctggcgggccgccgtggacggcgtatccttgtcgctgcgtcgcggagagacactg
gcgctggtgggcgaatcgggctgcggcaagtcgatgacctcactgtcgatcatgggcctg
gtgccgcgcccggccgggcgaatcgccggcgggcgaatcgtgctggaaggccgcgacatc
gttccgttgccggagcatgcgctggagcagttgcgcggcgaccggatggcgatgatcttc
caggagccgatgaccagcctcaatccggtgatgaccatcggcgagcaggtggccgagccg
ttgcgcctgcatcgcggcctgtcgcgcgccgaggcggcgcggcgcgcgctcgcggtgctg
gaggaggtcaagatcccctcggccgcccgccgctatcatgaatacccgcaccagttctcc
ggcggcatgcgccagcgcgtgatgatcgcggtggcgctggcctgcgagccggcgctgctg
ctggccgacgaaccgaccaccgcgctggatgtcaccatccaggcgcaggtgctggggctg
ctggccgacctgaaggcgcggcacggcatggcgatgctgttcatcacccacaaccttggc
gtggtggcgcagatcgccgaccgggtggcggtgatgtacgccggccagatcgtcgaggaa
gccccggtgctggagatcttcgccgccccccgccatccctatacccgcgcgctgttcgcc
gcgatcccgcgcatggacctcgatgcgcaggaactcgccgccattcccggccgggtgccg
ccgctcgacgccatgccgcagggctgccgcttcgcgccgcgctgcccgctcgcccgcgcc
ggctgcgaggcgccgcaggcgctgctgccggccggaccggagcatcgggcccgctgtcat
ctcgccacgaaggaactggcccatgcttga
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