Rhodovastum atsumiense: RHOA_6068
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Entry
RHOA_6068 CDS
T08162
Name
(GenBank) 2-ketogluconate utilization repressor PtxS
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rap03000
]
RHOA_6068
Transcription factors [BR:
rap03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RHOA_6068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_IclR
HTH_3
TetR_N
HTH_Crp_2
KR
HTH_26
QRPTase_C
HTH_Tnp_ISL3
HTH_17
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CAH2604889
LinkDB
All DBs
Position
RHOA:complement(6265133..6266245)
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AA seq
370 aa
AA seq
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MLRRLPADVRRGTTVRRAATIADVAAYAGVSKATVSRFLSGRSDVLSETTWKQIQDAIAA
LDYRPSQIARSLKGGRTRLIGIVVADVTNPYSVAVLRGAEDECQRAGYMLALCNSGGSHA
KEQELLAGLRAYRIEGLILNSAGIAADQVSDALPDGLPIVLLDRKLPPGRFDFVGLNNIA
AATEATRHLVGHGFGDIALIAEPITGVSVRTERALGFRQAIAENEGCTGTVIEVDLHQPD
AMQQAVARFLATPSSRRKAVIAASGLVTLRTVQAIQSLGLHMPDDVGLVGFDELEWSALV
PPGITTIAQPTYDIGVAAVRNLLARLAGHRDEPHSTIFTGTLIERGSSASEAGLRPMAVP
APAQPAAGLV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttacggcgtttgcctgccgatgttcgccgcgggacaaccgtcaggcgtgcggcaacc
atcgcggacgtggcagcctatgccggcgtttccaaggcgacggtgtcccgtttcctcagc
ggccggtccgatgttctgtcggagaccacctggaagcagatccaggacgcgattgcggcc
ctcgactaccgcccgagccagatcgcgcgcagcctcaagggcgggcgaacccggctgatc
ggcatcgtggtggcggatgtcaccaatccctattcggtcgcggtgctgcgcggtgccgag
gatgaatgccagcgggccggctacatgctggcgctctgcaacagcggcggcagccatgcc
aaggaacaggaactgctggccgggctgcgcgcctaccgcatcgagggcctgatcctgaat
tcggccggcatcgccgcggaccaggtgtccgacgcgctgccggacggcctgcccatcgtg
ttgctggaccgcaagctgccgccggggcggttcgatttcgtcggcctcaacaacatcgcc
gccgcgaccgaggcgacacgccatctggtcgggcacggcttcggcgatatcgccctgatc
gccgaacccatcaccggggtcagcgtgcgcaccgagcgggcgctcgggttccgccaggcc
atcgcggagaacgaaggctgcaccggcaccgtgatcgaggtcgacctgcaccagccggac
gcgatgcagcaggccgtggcgcgcttcctcgccaccccctcgtcacggcgcaaggcggtg
atcgcggcgagcggcctggtgaccttgcggaccgtgcaggccattcagtccctggggctg
cacatgcccgatgatgttggcctggtgggcttcgacgaactcgaatggtccgccctggtg
ccgccgggaatcaccacgatcgcgcagcccacctacgacatcggcgtcgccgccgtgcgc
aacctgctcgcccgcctggccggccatcgtgacgagccgcacagcaccatcttcaccggc
acgctgatcgagcgcggttcctccgccagcgaggccggtctgcgtcccatggcggttccg
gcgcctgcccagcccgcggccgggctggtctga
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