Rhodovastum atsumiense: RHOA_6112
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Entry
RHOA_6112 CDS
T08162
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthetase subunit beta
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00220
Arginine biosynthesis
rap00240
Pyrimidine metabolism
rap00250
Alanine, aspartate and glutamate metabolism
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RHOA_6112 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RHOA_6112 (carB)
00220 Arginine biosynthesis
RHOA_6112 (carB)
Enzymes [BR:
rap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RHOA_6112 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
GARS_A
ATPgrasp_Ter
RimK
ATP-grasp_5
ATP-grasp_2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
CAH2604930
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All DBs
Position
RHOA:6311692..6314934
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AA seq
1080 aa
AA seq
DB search
MPKRTDIHSILIIGAGPIVIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPGL
ADATYVEPITPEFVERIIARERPDAVLPTMGGQTALNTAMKLAASGVLEKYGVELIGAKA
DVIDRAEDRLKFRDAMAEIGIESPRSAIAHSMEEARAALAQVGLPAVIRPSFTLGGTGGG
IAYNREEFERIVTGGLDASPTKEVLIEESVLGWKEYEMEVVRDRADNCIIVCSIENVDPM
GIHTGDSVTVAPALTLTDKEYQRMRDASIACLRKIGVDTGGSNVQFAVNPADGRMVVIEM
NPRVSRSSALASKATGFPIAKVAARLAVGYTLDELTNDITRTTPASFEPTIDYVVVKIPR
FTFEKFPGTPPMLTTSMKSVGEAMAIGRSFAEALQKGLRSMETGFSGLDPIEPPGDGGAD
AFRAALSQPKPDRLLMAAQALRAGLSVEEIHSTCKFDPWFLRELERIVQAERAVAAQGLP
QEAGALRRLKALGFSDRQLAQLAGVTEPEVAALRDKLGVHAVYKRIDTCAAEFGSATPYM
YSTFEGGFGTPVCEADPSAREKVIILGGGPNRIGQGIEFDYCCVHAAYALKEAGFETIMV
NCNPETVSTDYDTSDRLYFEPLTAEDVIALVRREQSSGKVLGCIVQYGGQTPLKLSQSLA
KAGIPILGTSADAIDIAEDRERFQHLLQRLGLRQPENGTARSTGEAEAIAERIGYPVVIR
PSYVLGGRAMEIVHDQKGLHRYMREAVRVSGDNPVLIDRYLNDAIEVDVDCIADGETVYV
AGVMEHIEEAGIHSGDSACALPPYTLSPAAVTELKAETEAMAKALGVVGLMNVQYAIKDN
EIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGARLSEFRLDPQAVAPHVAVKEAVF
PFNRFPNVDTILGPEMKSTGEVMGLDSSFERAFAKSQLGAGVRLPDHGTVFLSVRDADKA
GAVAVARRLVEMGFSIMATRGTASRLREAGIAVSPVNKVLEGRPHCVDAIRSGDIQMVIN
TASGAQSVTDSFEIRRSALTHGVPHYTTIAGARAAAHAIAALRSGALEVAPLQAYFRGSF
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcaccgacatccactccatcctgatcatcggcgccggcccgatcgtcatc
ggccaggcctgcgagttcgactattcgggcgcgcaggcctgcaaggcactgaaggccgag
ggctaccgcaccatcctggtcaactccaacccggccacgatcatgaccgatccggggctg
gcggacgcgacctatgtcgagccgatcacccccgaattcgtcgagcgcatcatcgcccgc
gagcgccccgacgcggtgctgccgaccatgggcgggcagaccgcgctgaacacggcgatg
aagctcgccgccagcggcgtgctggagaaatacggcgtcgagctgatcggcgcgaaggcc
gacgtgatcgaccgcgccgaggaccggctgaagttccgcgacgccatggccgagatcggc
atcgagagcccgcgcagcgccatcgcccattcgatggaggaagcgcgcgcggcgctggcg
caggtcggcctgcccgccgtcatccgcccgagcttcaccctcggcggcaccggcggcggc
atcgcctataaccgcgaggaattcgagcgcatcgtcaccggcggcctcgacgcctccccc
accaaggaagtgctgatcgaggaatcggtgctcggctggaaggaatacgagatggaggtg
gtccgcgaccgcgcggacaactgcatcatcgtctgctccatcgagaacgtcgatccgatg
ggcatccacaccggcgactcggtcacggtggcaccggcgctgacgctgaccgacaaggaa
tatcagcgcatgcgcgatgcctcgatcgcctgcctgcgcaagatcggcgtcgacaccggc
ggatcgaacgtgcagttcgcggtcaacccggccgacggacgcatggtggtgatcgagatg
aacccgcgggtgtcgcgctcctcggcgctggcgtccaaggccaccggcttcccgatcgcc
aaggtcgcggcgcggcttgccgtcggctacacgctcgacgaactcaccaacgacatcacc
cgcaccacgccggcgagcttcgagcccaccatcgactacgtcgtggtcaagatcccccgt
ttcaccttcgagaaattccccggcacgccgccgatgctgaccaccagcatgaagtcggtc
ggcgaggcgatggcgatcgggcgcagcttcgccgaggcgctgcagaaggggctgcgcagc
atggagaccgggttctccggcctcgatccgatcgagccgcccggcgatggcggcgccgac
gccttccgcgcggcgttgtcccagcccaagcccgaccggctgctgatggccgcccaggcg
ctgcgcgccgggctctcggtcgaggaaatccacagcacctgcaagttcgacccgtggttc
ctgcgcgagctggaacggatcgtgcaggccgagcgcgcggttgctgcccagggcctgccg
caggaagcgggcgcgctgcggcggctgaaggcgctgggtttctccgaccggcaactggcg
cagctggccggcgtcaccgagccggaggtcgccgccctgcgggataagctgggtgtgcac
gctgtctacaagcgtatcgacacctgcgccgccgaattcggttcggccacgccgtacatg
tactcgaccttcgagggcggcttcggcaccccggtctgcgaggccgatccctccgcgcgc
gagaaggtgatcatcctgggcggcggcccgaaccgcatcggccagggcatcgagttcgac
tattgctgcgtgcacgcggcctatgcgctgaaggaagccgggttcgagaccatcatggtc
aactgcaacccggaaaccgtctccaccgactacgacacctccgaccgcctttatttcgag
ccgctgaccgccgaggacgtgatcgcgctggtgcgccgcgagcaatccagcggcaaggtg
ctcggctgcatcgtccagtacggcgggcagacgccgctgaagctgtcgcagtcgctggcc
aaggccggcatcccgatcctcggcaccagcgccgacgccatcgacatcgccgaggaccgc
gagcgcttccagcatctgctgcagcggctcgggctgcgccagccggagaacggcaccgcc
cgctcgaccggggaagccgaggcgatcgccgagcgcatcggctatccggtggtgatccgc
ccgagctacgtgctcggcggccgtgccatggagatcgtgcacgaccagaagggcctgcac
cgctacatgcgcgaggcggtgcgcgtctccggcgacaacccggtgctgatcgatcgttac
ctcaacgacgcgatcgaagtggacgtggactgcatcgccgatggcgagacggtctatgtc
gccggggtgatggagcacatcgaggaagccggcatccattccggcgactccgcctgcgcc
ctgccgccctacacgctgagcccggccgcggtgaccgagctgaaggccgagaccgaggca
atggcgaaggcgctcggcgtggtcggcctgatgaacgtgcaatacgcgatcaaggacaac
gagatcttcgtgttggaggtgaacccgcgtgcctcccgcaccgtgcccttcgtcgccaag
gccaccggcgtgccggtcgccaagatcggcgcgcgggtgatggccggggcacggctgtcg
gaattccgcctcgacccgcaggcggtggcgccgcacgtggcggtgaaggaagcggtgttc
ccgttcaaccgcttccccaatgtcgacaccatccttggcccggagatgaaatcgaccggc
gaggtgatgggactggattccagcttcgagcgcgccttcgccaagagccagctcggcgcc
ggggtgcggctgcccgatcacggcaccgtgttcctttcggtgcgcgacgcggacaaggcc
ggggcggtcgcggtggcgcggcggctggtggagatgggcttctccatcatggccacgcgc
ggcaccgccagccggctgcgcgaggccggcatcgccgtctcgcccgtcaacaaggtgctg
gaaggccggccgcattgcgtggacgcgattcgctccggcgatatccagatggtgatcaac
accgcctcgggcgcgcagtcggtaaccgacagtttcgagatccgccgcagcgccctcacc
cacggtgtaccgcactacaccaccatcgccggcgcccgggccgcggcccatgccatcgcg
gcgctgcgcagcggggcacttgaagttgccccgctccaggcctattttcgcggatcgttc
tga
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