Rhodovastum atsumiense: RHOA_6173
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Entry
RHOA_6173 CDS
T08162
Symbol
oppD
Name
(GenBank) murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_6173 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_6173 (oppD)
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHOA_6173 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ABC_ATPase
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAH2604991
LinkDB
All DBs
Position
RHOA:complement(6385344..6386339)
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AA seq
331 aa
AA seq
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MPLLDVQDLVVEFPTRRGVLRALDGVSLAIDPGEVLGVVGESGAGKSMTGAAIIGLLEPP
GRIAGGRILLDGNRIDDLPPERMRLIRGRQIGAIFQDPLTTLNPLHSVGRQLVETMQTHL
RLSDRDARERAVQWLEDVGIPAARRRIDAYPHEFSGGMRQRVVIALALCAEPRLIIADEP
TTALDVSIQAQIIALLRRLTRDHGTSVMLVTHDMGVIAETADRVAVMYAGRIAEIGPVRD
VVKHPAHPYTEGLMGSIPSLEHRVGRLRQIDGAMPRLNAIPPGCAFNPRCPRVFDRCHVE
RPDLLQAGATRAACWLHDRGAVHPAQVAADA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgctcgacgtgcaggacctggtggtcgaattcccgacgcggcgcggcgtgctg
cgtgccctcgacggcgtttccctcgccatcgatcccggcgaggtgctcggggtggtgggc
gagagcggggcgggcaagtcgatgacgggcgccgccatcatcggcctgctggaacccccc
ggccggatcgccggcgggcgcatcctgctggatggcaaccgcatcgacgacctgccgccc
gagcgcatgcgcctgatccgcggccgccagatcggcgcgatcttccaggatccgctgacc
acgctcaatccgttgcattcggtcggccgccaactggtcgagaccatgcagacgcatctg
cgcctgtccgaccgcgacgcccgcgaacgggccgtccaatggctggaggatgtcggcatc
ccggcggcgcgccgtcgcatcgacgcctatccgcacgaattctccggcggcatgcgccag
cgcgtggtgatcgcgctcgcgctctgcgccgagccgcgcctcatcatcgccgacgagccg
accaccgcgctcgatgtgtcgatccaggcgcagatcatcgcgctgctccggcgcctcacc
cgcgaccacggcacctcggtgatgctggtgacccatgacatgggggtgatcgccgagacc
gccgatcgcgtcgccgtcatgtatgccggccgcatcgccgagatcgggccggtgcgcgac
gtggtgaagcatcccgcccacccctacacggaaggcctgatgggcagcatcccttcgctc
gagcatcgggtcgggcggctgcgccagatcgatggcgccatgccccgcctgaatgccatc
ccgccgggctgcgccttcaatccgcgctgcccgcgtgtgttcgaccgttgccatgtcgag
cgcccggacctgctgcaggccggcgccacccgcgccgcctgctggctgcatgatcgcggc
gcggtgcacccggcccaggtggcggccgatgcctga
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