Rhodovastum atsumiense: RHOA_6203
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Entry
RHOA_6203 CDS
T08162
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RHOA_6203 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rap03019
]
RHOA_6203 (rnc)
03009 Ribosome biogenesis [BR:
rap03009
]
RHOA_6203 (rnc)
03036 Chromosome and associated proteins [BR:
rap03036
]
RHOA_6203 (rnc)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RHOA_6203 (rnc)
Messenger RNA biogenesis [BR:
rap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHOA_6203 (rnc)
Ribosome biogenesis [BR:
rap03009
]
Eukaryotic type
90S particles
RNase
RHOA_6203 (rnc)
Prokaryotic type
rRNA processing factors
RHOA_6203 (rnc)
Chromosome and associated proteins [BR:
rap03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RHOA_6203 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
CAH2605021
LinkDB
All DBs
Position
RHOA:6418576..6419343
Genome browser
AA seq
255 aa
AA seq
DB search
MAVRDPLAPSLLGDSLSGQAALPAHARAQEILGHDFAKPDLLREALTHRSAVAGRLLARG
RTARSNGAGSNERLEFIGDRVLGLLIAEWLAERFPQEQEGQLGPRLAHLVSQPVLAGIAE
RLGLPAVLQVAPGESRAGVRRLATVLADAMEALIGALYLDGGLETARRFVRHAWDDPMNS
LAEPPKDPKTALQEWLLARGMQLPNYTMVSREGPPHDPVFVIAVAAAGQEGTGTAGSKRI
AERLAAEDLLRKLRG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttggccgttcgagatccgctggcgccgtctcttctcggggattcactgagcggccaggcc
gcgctgccggctcacgcccgggcgcaggagatcctcgggcacgacttcgccaaacccgac
ctgctgcgcgaggccctcacccatcgctccgcggtggccggccgcctgctcgcccgcggg
cggaccgcccgcagcaacggcgccggttccaacgagcggctggagttcatcggcgaccgg
gtgctcggcctgctgatcgccgagtggctggccgaacgtttcccgcaggagcaggaaggc
cagctcggcccccgactcgcgcatctggtctcgcagcccgtgctcgccggcatcgccgag
cgcctggggctgcctgccgtgctgcaggtggcgccgggcgaatcccgcgccggggtgcgc
cggctcgccaccgtgctggccgacgcgatggaagcgctgatcggcgcgctctatctcgac
ggcgggctggaaaccgcgcgccggttcgtccgccacgcctgggacgatcccatgaacagc
ctggccgagccgcccaaggaccccaagacggcgctgcaggaatggctgctcgcgcgcggc
atgcaattgcccaactacaccatggtttcccgcgaagggccgccgcatgatccggtgttc
gtgatcgcggtcgccgccgccggccaggaaggcaccggcacggccggcagcaagcgcatc
gccgaacgccttgccgccgaggacctgctgcggaaactgcgcggatga
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