Rhodovastum atsumiense: RHOA_PA0162
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Entry
RHOA_PA0162 CDS
T08162
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00630
Glyoxylate and dicarboxylate metabolism
rap00680
Methane metabolism
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHOA_PA0162
09102 Energy metabolism
00680 Methane metabolism
RHOA_PA0162
Enzymes [BR:
rap01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RHOA_PA0162
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_8
Fer4_2
Fer4_18
TPP_enzyme_M
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
CAH2605582
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All DBs
Position
RHOApa:complement(178913..181753)
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AA seq
946 aa
AA seq
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MGLMRDTDYGTPPVASGRQVRLVIDGNAVEVPEGTSIMRAAMQAGIKVPRLCTTDSLQAF
GSCRLCLVEIEGRPGTPASCTTPVAAGMQVWTQTPKLQRLRRNVMELYISDHPLDCLTCA
ANGDCELQDMAGEVGLRSVRYATGANHLSASKDESNPYFAFDPAKCILCSRCVRACEETQ
GTFALTIAGRGFGSQVAAGMGEALLGSECVSCGACVQACPTATLIEKSVIETGQPERAVV
TTCAYCGVGCSFRAELRGAELVRMVPHRDGAANRGHSCVKGRFAWGYATHRDRILRPMLR
ARITDPWREVSWEEAIAHVVTEFSRIRETHGPGSLGGITSSRCTNEETFLVQKLVRTVFG
TNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEHCDVVMVIGANPTDGHPVFASRLK
RRLRQGAKLIIIDPRRIDLVRTPHVEAAYHLALRPGTNVAVLTSIAHVIVTEGLVDTAFV
QARCESDAFEDWAAFVAEPRHSPEAIERISGVPAGVIRGAARLYATGGNAAIYYGLGVTE
HSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELSGYRHVGDDA
TRALFEAAWGVPLEREPGLRIPNMLDAAIAGSFKALYVQGEDIAQSDPDTQHVAAGLSAM
ECVVVQDLFLNETANFAHVFLPGSTFLEKDGTFTNAERRINRVRRVMPPRNGMADWEITQ
ALARGFGHGWNYAHPSEIMDEIARLTPGFAGVSYDLLEQRGSVQWPCNTTAPEGTPVMHI
DGFARGRGLFVLTEYIPTEERTGPRFPLLLTTGRILSQYNVGAQTRRTANVVWHEEDVLE
MHPHDAEHRGLRDGDWVRLASRSGETTLRLRVTDRVVIGVVYTTFHHPLTQANVVTTDFS
DWATNCPEYKVTAVQVSGSNGPSDWQEAYRRHSEASRRVSTAPAAE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgatgcgcgacaccgattacggaacgccgccggtcgcatccgggcggcaggtg
cggctggtcatcgacggcaatgcagtggaggtgccggagggcacctccatcatgcgtgcc
gccatgcaggcgggcatcaaggtcccgcgcctgtgcaccacggattcgctgcaggctttc
ggctcgtgccggctgtgcctggtggaaatcgaaggccgcccgggaacgccggcctcctgc
accacgccggtggcggccggcatgcaggtctggacacaaacgccgaagctgcagcggctg
cggcgcaacgtgatggaactctacatctccgaccatccgctcgactgcctgacctgcgcg
gccaatggcgattgcgagctgcaggacatggcgggcgaggtcgggctgcgctcggtgcgc
tacgccacgggcgcaaaccacctctcggcgagcaaggacgaaagcaacccgtatttcgcc
ttcgatccggccaaatgcatcctgtgctcgcgctgcgtgcgcgcctgcgaggaaacgcag
ggaaccttcgcgctgaccatcgccggccgtggcttcggctcccaggtcgccgccggcatg
ggggaggcgctgctcggctccgaatgcgtctcctgcggtgcctgcgtgcaggcctgcccg
accgcgacgctgatcgagaaatccgtgatcgaaaccggacagccggaacgtgcggtcgtc
accacctgcgcctattgcggcgtcggctgcagcttccgcgccgagctgcgcggggccgaa
ctggtgcgcatggtgccgcatcgggacggcgcggccaatcgcggccattcctgcgtcaag
ggccgcttcgcctggggctatgccacgcatcgcgaccgcatcctgcggccgatgctgcgg
gcgcgcatcaccgatccctggcgcgaggtcagctgggaggaggcgattgcccatgtcgtc
accgaattcagccgcatccgcgagacgcatgggccgggttcgctcggcggcatcacctcc
tcgcgctgcaccaatgaagagacgttcctggtgcagaagctggtccgcaccgtcttcggc
accaacaatgtcgatacctgcgcccgcgtctgccactcgccgaccggctacggtctgaag
accaccttcggcacctcggcgggcacgcaggatttcgacagcgtcgaacactgcgacgtg
gtgatggtgatcggcgccaacccgaccgacggccacccggtcttcgcctcccgcctgaag
cggcggctgcgccagggggcgaagctgatcatcatcgatccacgccgcatcgatctggtg
cgcacgccgcatgtcgaggcggcctatcatctggccttgcgccccggcaccaatgtcgcg
gtgctgacttcgatcgcgcatgtgatcgtcaccgaagggctggtcgacaccgcgttcgtg
caggcccgctgcgagagcgacgccttcgaggactgggccgccttcgtcgccgaaccgcgc
cacagcccggaggccatcgagcgcatcagcggcgtaccagccggggtgatccgtggcgcg
gcgcggctgtacgcgaccggcggcaatgccgcgatctattacggcctgggcgtgaccgag
cacagccagggcagcaccacggtgatggcgatcgccaacctggcgatggcgaccggcaat
atcggccggcccggcgttggggtgaatccgctgcggggacagaacaacgtccagggctcc
tgcgacatgggctcgtttccgcacgagttgtcgggctaccgccatgtcggcgacgatgcc
acccgcgccctcttcgaagccgcctggggcgttccgctggagcgtgagcccggcctgcgc
atcccgaacatgctggatgcggcgatcgccggcagcttcaaggcgctttatgtccagggc
gaggacatcgcgcaatccgatccggacacgcagcacgtggcggccgggctgtcggcaatg
gaatgcgtcgtggtacaggacctgttcctgaacgagacggcgaacttcgcccatgtcttc
ctgccgggatcgaccttcctggaaaaggacggcaccttcaccaacgccgaacggcggatc
aaccgggtgcggcgggtgatgccgccacgcaacggcatggccgactgggagatcacccag
gccctggcacgcggcttcgggcatggctggaattacgcgcatccctccgaaatcatggac
gagatcgcacggctcaccccaggcttcgccggcgtcagctacgatctgctggagcagcgg
ggctcggtgcagtggccctgcaacacgacagcaccggaaggtaccccggtcatgcatatc
gatggcttcgcgcgcgggcgcggcctgttcgtgctgaccgagtacatccccaccgaggag
cgaaccggaccgcgcttcccgctgctgctgaccaccggtcgtattctgagccagtacaat
gtcggggcgcagacccggcgcaccgcgaatgtcgtctggcacgaggaagatgtgctggag
atgcatccccatgatgccgagcaccggggattgcgcgacggcgactgggtacggctcgcc
agccgttcgggggaaaccacgctgcggctgcgcgtcaccgatcgcgtggtaatcggcgtg
gtctacaccacgttccaccaccccctgacccaggccaacgtggtgaccacggatttttcg
gattgggcgaccaattgtcccgaatacaaggtgacggcggtgcaggtctcgggctcgaac
ggcccgagcgactggcaggaagcctaccggcgccacagcgaggccagccggcgggtcagc
accgcgccggccgccgaatga
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