Rhodovastum atsumiense: RHOA_PB0204
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Entry
RHOA_PB0204 CDS
T08162
Name
(GenBank) transposase
Organism
rap
Rhodovastum atsumiense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_ISL3
zf-ISL3
HTH_18
Motif
Other DBs
NCBI-ProteinID:
CAH2605827
LinkDB
All DBs
Position
RHOApb:183441..184988
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AA seq
515 aa
AA seq
DB search
MFSLLPFLLPRLSIRQVLLTPDGITIQADVKSASAPCPDCGRRSRRRHSHYHRTLADLPL
QDRVARLQVLVRRFRCDTPGCRRRIFAERLPDIAVVRARRTTRLANSQRQIGLSLGGEPG
ARLAVRLAMPISGDTLLRLIRTAPLASHPPPRVIGIDDWAWRRGHRYGSIICDLERRRIV
DLLPDRTVETVRSWLAGRTGITVIARDRAGTYAQAATTACPHAMQVADRWHLMENASAAL
LDAVQRSMRQIRDALGTTSFDPALLTSAERRQHEGFLRRAAADRAIHHLAGSGVPIKEIV
RRTGYSRKVVRAVVRGGRTDVFRVRASMLDAFVPRLNAEWDGGCRNGAELWRRLRATGFT
GALRVVSEWATRRRRAESAPGMLPRKPPPARTLARLLSHQRDRLSMADARLVAVVEDAVP
RAAGRGVIGQALPGHASHEDGGARELAHGRQRKFACGVCRGHRCRPRRGHSCDHRTMVER
SNRRADQQGEAAETTDVWPRGPRSSASPAHRRMTA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgttctctcttctcccgtttcttctgccgaggctttccatccgccaggttctgctcact
cctgacggcatcacaatccaggctgacgtgaagtcggcatccgcgccgtgccctgactgc
ggcaggcggtcgagacggcggcacagccactatcaccgcaccctggccgatttgccgctt
caggaccgcgtcgcgcgcctgcaggtgctggttcgacgcttccgctgtgacacgccaggc
tgtcgccgtcggatctttgctgaacgactgcccgacatcgccgtggtcagggcgcggcga
accacgcggctcgcgaatagccaacgccagatcggactgtcgctgggcggcgagccgggg
gcacggttggcggtgcggcttgccatgccgatcagcggcgacactctgctgcgcttgatt
cgtacggccccgctcgcatcccatccgccgccgcgggtgatcggcatcgacgactgggca
tggcgccgggggcaccgctacgggtccatcatctgtgatctggaacggcggcgcattgtc
gatcttcttcccgatcgcacggtggaaaccgtgcgatcgtggctggccgggcgcaccgga
atcactgtgatcgcgcgcgaccgcgcgggtacctacgcccaggcagcgaccacagcttgc
ccccatgcgatgcaggtggccgatcggtggcatctgatggaaaacgccagtgccgcgttg
ctcgacgccgtgcagcgatcgatgcgacagatccgtgacgctctcgggactacgtctttc
gacccggcgttactgacctctgccgagcgacgccagcatgagggatttctgcgtcgcgcc
gcagccgacagggccattcaccacctcgccgggagcggcgtaccgatcaaggaaatcgtc
cgccgcaccgggtacagccgcaaggtcgtgcgtgctgtcgtccgcggcggcaggacggac
gtcttccgcgtcagggcgagtatgctggatgcgttcgtgccacgcctcaacgcggaatgg
gatggcggttgccgcaacggcgccgaactctggcgtcggctcagagccaccggcttcacc
ggtgcgctgcgcgtggtcagcgaatgggcgacgaggcgcaggcgggccgaatccgcgcca
gggatgttgccgcgcaagccgccgccggcgcgaactcttgcgcggcttctcagccatcag
cgggaccggctttcgatggccgacgcaagattggtcgcggtggtggaggacgcggttccg
cgcgctgcgggtcgcggcgtcattggtcaagcgcttccaggacatgcttcgcacgaagac
ggcggcgctcgagaactggctcacggacgccagaggaagtttgcttgcggcgtttgccgc
gggcatcgctgcagaccgcgccgcggtcacagctgcgatcaccgaaccatggtcgaacgg
tcaaaccgaagggcagatcaacaaggtgaagctgctgaaacgacagatgtatggccgcgc
gggcctcgatcttctgcgagcccggctcatcgccgcatgacggcataa
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