Rhodovastum atsumiense: RHOA_PC0130
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Entry
RHOA_PC0130 CDS
T08162
Name
(GenBank) Relaxase domain-containing protein
Organism
rap
Rhodovastum atsumiense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
TraI_hel_assoc_N
AAA_11
SLFN-g3_helicase
KdpD
TraI_2B
Viral_helicase1
SH3_13
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAH2605967
LinkDB
All DBs
Position
RHOApc:109364..112309
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AA seq
981 aa
AA seq
DB search
MLSAAAIKSANQAASYFAKDNYYTAEAEGPSAWWGAGATAAGFSGGVDAARFEAALRGEL
PDGTRLGTERNGEWQHKPGWDLTWSAPKSVSLLALVGGDTRLITAHDNAVRVAMAHIEGT
QVHTRVRHGGDVALVQTDNLAAALFRHDVNRNQEPQLHTHAVVRNATRTEDGQWRSIESR
PMLKAIKASGEFYRAHLAAEIRRLGYDIVPGKDGTFEIAGIGQETLDRFSSRSAQVEARL
EDKGLTRATASTGQKMDAALRSRRAKEPVDRAVLTAAWRARLGEDLRALASLVRTATRHE
QSYTRFAWSQQRAAREAVETAISALSEREQAFSHDRLMQAASRFALGRATPDAVERAVAH
LVTAGALVPRDVTEPSPQIRADTIRPGYTTPAAIRTELKLFDLLDHAKGTARPFLSANAA
QAAVRAAEERSAATGHGWNDAQRAAAAGILRSRDRTVVLQGAAGTAKTSTVLATVAAAAS
AAGHTVRALAPSASAAQTLGKALHLEGQTVHRFLSDLARDGASPGLLDRLADGREVWIVD
EMSLLGTGKTVELLQAAKEQRARVILTGDRLQLGSVEAGQAFTQAQERGLETFRLDEIVR
QQTAEGRAAVKAIITRDAATAFQALERDSGRIVEEATANDRIMMMARHYAGLSPAERANT
LLIDPSREGSEAIKGTVRTLLRMQGELAGPTAHGTRLLDAGLGNAEKQSAVSYTVGQVIR
TAKGLDTEDGRLGPGEYAVISAIDTRQDRLTLRTGDGQARTLATRGIDPRHLDVFQPAQG
DLQLGDRIRWNRNDTRLGLARGDFGTVTAIDGNQATIGFEKGRELRLDVTEPRHQHYDYA
YAVTAYSAQGMTKDWVLHAESWRVNLINWRSMYVGISRGTTSGTIITDDRALLEEAIGVR
AGEKSLAIDPSLITRVRDATQEAVSNATRSQIVVEAEQPHEDEALHQRAARAIMARIKGH
QSTVSPETSKSNGHELNINPE
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgccgccgccatcaagagcgccaaccaggccgccagctacttcgccaaggac
aactactataccgccgaggccgagggcccgagcgcctggtggggcgccggcgccaccgcg
gcgggcttctccggcggcgttgacgctgcgcggttcgaggccgccctgcgcggcgagctg
ccggacggcacccggctcggcaccgagcggaacggtgaatggcagcacaagccgggttgg
gacctgacctggtcggccccgaaatcggtctccctcctcgctctggtcgggggcgacacc
cggctgatcacggcacacgacaacgccgtgcgcgtggcgatggcgcatatcgagggcacc
caggtccatacccgcgtccgccacggtggagatgtcgcgctcgtccagaccgacaacctc
gccgccgccctgttccgccacgacgtcaaccgcaaccaggagccgcaacttcacactcac
gccgtcgtgcgcaacgccacccgcaccgaagatgggcagtggcgcagcatcgagagcagg
ccgatgctcaaggcaatcaaagccagcggggaattctaccgggcccatctcgccgccgaa
atccgccgcctcggctatgacatcgtgcccggcaaggacggcaccttcgagatcgccggt
atcggccaggagaccctcgaccgcttctcctcccgctccgcccaggtcgaggcgcgcctc
gaggacaaggggctgacccgggccaccgcgtcgaccgggcagaagatggatgcggccctg
cggagccgccgcgccaaagagccggtcgaccgcgccgtgctgacggccgcgtggcgggcc
cgcctcggcgaggacctgcgggcgctggcctccctggtgcgaaccgccacgcggcacgaa
cagtcctatacgcggttcgcctggtcgcagcagcgggccgcccgggaggcggttgaaact
gccatttccgctctctcggaacgggagcaggccttctcgcatgaccggctcatgcaggcg
gccagccgcttcgcgctcgggcgcgccacgccggatgccgtcgaacgggcggtcgctcac
ctggtcacggccggcgccctggtcccgcgtgacgtcaccgagccctcgccgcagatccgg
gccgataccatacgtcccgggtacacgacccccgccgccatccgcaccgagctcaagctg
ttcgacctgctcgaccatgccaagggtacggcacggccattcctctccgccaacgccgcc
caggccgctgtccgggccgcggaggagcgctccgcggcgacagggcacggctggaacgac
gcccagcgcgccgccgccgccggcattctcaggtcacgcgaccggaccgtggtgctgcaa
ggcgcggccggcaccgccaagacctccactgtactcgccaccgtcgccgctgccgccagc
gccgcgggccacaccgtgcgggccctcgcgccgtccgcctccgccgcgcagacgctcggc
aaggccctccatctggaagggcagaccgtgcaccgcttcctgtctgacctggcgcgggac
ggcgcctccccggggctgctcgaccgtctggccgatggccgcgaggtgtggatcgtcgac
gagatgagcctgctcggcaccgggaaaacggtggaattgctgcaggcggcgaaagagcag
cgcgccagggtcatcctcaccggcgaccggctccagctcggcagcgtcgaagccggccag
gcgttcacccaggcgcaggagcggggcctggagactttccggctcgatgagatcgtccgc
cagcaaaccgccgagggtcgcgccgcggtcaaggccatcatcacccgcgatgccgccacc
gccttccaggcgctggaacgcgacagcggacggatcgtcgaagaggccaccgccaacgac
cggatcatgatgatggcccggcactacgccggcctttctccggcggagcgggccaatacc
ctcctgatcgaccccagccgggagggcagcgaggcgatcaagggcacggtccgcaccttg
ctgcggatgcagggcgagttggccgggcccacggcgcacggcacccgcctgctcgatgcc
gggctcggcaacgcggagaagcagtcggccgtctcctatacggtcggccaggtgatccgc
acggccaagggcctggacaccgaggacggacggctgggcccgggcgaatatgccgtcatc
agcgcgatcgacacccgccaggatcgcctgaccctccgcaccggggatggccaggcccgc
accttggccacccgcggcatcgacccacgccacctggacgtcttccagccggcgcaaggt
gacctgcagctcggcgaccgcatccgctggaaccgcaacgacacccggctcgggctggcg
cgcggtgactttggaaccgtcacggccatcgacggcaatcaggcgaccatcggctttgag
aagggacgcgagctacggctcgacgtcaccgagcctcgtcaccagcactacgactacgcc
tatgccgtgaccgcctacagcgcgcagggcatgaccaaggattgggtgctgcacgcggaa
tcctggcgggtgaacctgatcaactggcgcagcatgtacgtcggcatctcacgcggtacg
accagcggcaccatcatcacggatgaccgtgccctcctagaggaggcgatcggtgttcgt
gccggcgagaagagccttgccatcgaccccagcctgatcacccgcgtccgcgacgccact
caggaagccgtcagcaatgccacgcgcagccagattgtcgtcgaggccgaacagcctcac
gaggacgaagcgcttcatcagcgcgccgcccgcgccatcatggccaggatcaaaggccac
caatccaccgtatcacctgaaacgtcgaaatcaaatggccatgaattaaatattaatcca
gaatga
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