Rhodovastum atsumiense: RHOA_PD0020
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Entry
RHOA_PD0020 CDS
T08162
Symbol
vsr
Name
(GenBank) XorII very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_PD0020 (vsr)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RHOA_PD0020 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Ribosomal_L18A
BCNT
Motif
Other DBs
NCBI-ProteinID:
CAH2606070
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All DBs
Position
RHOApd:13819..14304
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AA seq
161 aa
AA seq
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MPPPAAPRQLPRPDFSDVPEARRRNMAAVRGRDTKPEMAVRQMLHAMGYRFRLQRQDLPG
RPDIVLPGRHAVVDVRGCFFHRCPNPGCKNSVLPKTRADWWAAKLARNVERDLANQAALE
SAGWRVFVVWECQVRSDRGALAQKLADFLGPPGIARRESEP
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgccggccgcccctcgccagctgccccgtccggacttctcggatgtccccgag
gcgcgccgccgcaacatggcggccgtccggggcagggacaccaagcccgagatggcggtc
cgccagatgctgcatgcgatgggttaccgcttccggctgcagcgccaggaccttccaggg
cggcccgacattgtgctgccggggcgccatgcagtggtggatgtaagggggtgttttttc
caccgctgtcccaacccgggctgcaaaaactccgtgctgccgaagaccagggccgactgg
tgggcggccaagcttgccaggaacgtcgagcgtgacttggccaatcaggcagccctggag
tcggctggctggcgggtttttgttgtctgggagtgccaagtgcgttcagaccggggggcg
ctggcccaaaaactggcagattttcttggtccaccagggattgcacgcagggaatcggag
ccctga
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