Rhodovastum atsumiense: RHOA_PD0105
Help
Entry
RHOA_PD0105 CDS
T08162
Name
(GenBank) PBSX family phage terminase large subunit
KO
K06909
phage terminase large subunit
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RHOA_PD0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terminase_3
Terminase_6C
Motif
Other DBs
NCBI-ProteinID:
CAH2606155
LinkDB
All DBs
Position
RHOApd:complement(87356..88609)
Genome browser
AA seq
417 aa
AA seq
DB search
MGTAAAIEFPAKLDFLFEPAPFKVLHGGRGSSKSWSVARALLILGAQRPLRILCAREYQT
SIKESVHKLLSDQIEMLGLRHLYTVQEKTIFGANGTEFIFAGMHLNSNKIRSTEGVNITW
VEEAQVVSKESWEALLPTVMRRDGSEIWITFNPDLETDETYKQFVLSPPPGAIVQQVNYY
DNPWFPKRLLPLVEHLKATDLDAYANVYLGECRKNVVGALWTKEMLAYLREPAVEDIAAR
EAMRARMARIVVAVDPSGCSGPDDKRSDEIGIVVVGLGRDGIAVVLEDLSGRFSPDGWAK
RALDAFDAWRADRIVAEKNFGGAMVESTIQTARRNAPVKLVTASHGKLQRAEPIAALYEQ
KKVHHAGAFPDLEQQLCHFSTAGYQGKRSPDHADACIWGLTELMLGDSTYDTSMNWV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgggaacggcagcagcgattgagttcccggcgaagctggatttcctgttcgagccagcc
ccattcaaggttctgcacggagggcgcggcagctcaaaatcgtggagcgtggcgcgcgct
ctgctgatactcggcgcccagcgccctcttcgaatcctgtgcgcccgcgagtaccagacg
tcgatcaaggagtccgtccacaagctcctgtccgaccaaatcgagatgctcggcctgcgg
catctctacacggtgcaggagaagacgattttcggcgctaacggcaccgagttcatcttc
gccgggatgcacctgaacagcaacaagatacggtcgaccgaaggtgtcaacataacctgg
gtcgaagaggcccaggtcgtatcgaaggaatcctgggaggcactcctgccgaccgtgatg
cggcgggacggctcggagatatggatcaccttcaacccggaccttgagaccgacgaaacc
tacaagcagttcgtcctgtccccgccgcccggcgccatcgtccagcaggtcaactactac
gacaacccgtggttccccaaaaggctgctcccgctggtcgagcacctcaaagccacggac
ctcgacgcatatgccaacgtctaccttggggagtgccgcaagaacgtcgtcggcgcgctc
tggacgaaggagatgctggcctacctccgggagccagccgtcgaggacatcgccgcacgc
gaggccatgcgcgcacgcatggcgcgcatcgtggtcgccgtggacccctcgggctgctcc
gggccagacgacaagcgctccgacgagatcgggatcgtcgtggtcggcctcggccgcgac
gggatcgcagtcgtcctcgaggacctgtcggggcgcttctcgccggacggctgggccaag
agggcgctcgacgccttcgacgcctggcgcgccgaccgcattgtcgcggagaagaacttc
ggcggggcgatggtcgaaagcacgatccagacggcaaggcgcaacgcaccagtcaagctg
gtgaccgcatcccacggcaagctgcagcgcgccgagccgatagccgccctctacgagcag
aagaaggtgcaccatgccggggcctttccggatctggagcagcagctctgccacttcagc
accgccggctaccagggcaagcggtcccccgaccacgcggacgcctgcatttgggggctt
accgaactgatgctcggcgattcgacctatgacaccagcatgaactgggtttga
DBGET
integrated database retrieval system