Rhodovastum atsumiense: RHOA_PE0139
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Entry
RHOA_PE0139 CDS
T08162
Name
(GenBank) conserved protein of unknown function
Organism
rap
Rhodovastum atsumiense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VgrG3-like_C
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
CAH2606340
LinkDB
All DBs
Position
RHOApe:90326..97597
Genome browser
AA seq
2423 aa
AA seq
DB search
MAGRVSIGISADPSGATQAFSQIQAAIKAAGLEGKRLAEVLASAHPALAPVRDDLQRMQA
QLEQLRRARGDTGAATRQITHEAGGPEHVDVLNLRDRAAQIFADQRDLRRYEANAGAFLI
RGTQWAPPPSPGPSPAPGQPDPQHQTRTGWLYGLDTWLSRRLGMTGRGSGGGGGGGGGSG
GGEEGGTDKGLLSGILDMGGAGGLLKATKFGLALAGISALGGMAVKGLGNAQDEAVSNDR
LSKTLRDAGTDFETLRRQVRDTADAFGLTFQEAQRYSLEWARLTNETSGRATQAGVSWAA
GVARSYGQDPGEVVQGLGRAAKQGEDPRRFAALVGEAVRESGMTGRFGEVMDALVRWTEQ
SNRQLADRSNVDLFAGMYSSLSSLGRPGLQGQGAEDVLNRINAVLTQGGGAGEASRHLTY
RALTRAGVTDPWEWQRIEEGGMFARIRRRRNERGELEDDPTAPTLFEAKWEEANRMYTGR
PETPAPRTETQQQANRRRAGIARDMGLTIRQVEAFEQAAPGGDIGRLFPTIERAGISMSD
VNPGALQPLITLAGENREQMEARRRGLLEDSTIALPPERREALQRAGTDDELRTALAQAI
NARGLEANDGTRTVEAMASFSNTLTGAMTGLVAPINDLKTVISAIARPLTRISEALGEGY
NRPPIEAVQGAGQKLGSWLREWWNGKGEDKPASPPGVTAPAAIAGQPGAAQPSAIPSWQR
PAGQGGQAQQVPPVTRPRQLPPLSADELRAQGIEVTEGALPESERGEEPIPLVPQRPREE
EKEEPETPQARATREDISRAFQAALSPRASARPATVAPPEPMAPQRPRAQAEAPAEEERP
APASELPGKPDVVPVPPASPLPEPNERPPHPPLVERPPAPPEGEPLPEGPAALPTVPPQS
APEPPEPAEPQAIPPREPADLPQPLPTLPPPERPDWYVPIPPPERAAVPPLPPPPPPGPE
PLATVPPMGLVEGPPRGEPTAIEPRRPAPPPNVSVNVTVPPPAPGTQAPASLVGAVSSQP
EARREAVPVPPVVSQNPGEMRGNEPRVSPDPSNAGAAPAASPAVEAPGSVDGRGRQVDAL
GRPVGGPAPAAGQVAPSPGQSTAGALPQQPPAVVPGAQAGTGVGPVFRPGAGAGAGGAGG
VGGAGGAGAPGESGRDGRDAAQAPAGRPGVQAIPPAPLPLTVPPAMPGAPGAGGAGGQAI
PPGPPPLTAPPAAPGAPGAGGAGGAGGEGTAGRDGRNAAPGGAGAGARAIPPGPVPLAAP
PAAPGVGGTTPAAPGAPTRHPGIVPTAPVGAGAAPVLEPGAGGAGGEGVAGQSGRDAASA
LAGAPGAQAIPPGPSPLTVPPAASGVGGATPTAPAEVGRPGAQPVPPGSQPQQPMTAPPA
APGAAPVLRPGAGGAGPQVIGPQPLSAPPVAPEVGRGGAGPAAGAGAGGAGGAGAQGGEG
GSGAVGPAGERGPGAVSGYPPASVRPSSDIIRRADQGYARQPGAPGADGGQNAPLPASPA
PILPPPAGGAVAPLPRRPSRVPRQGEEPQTPSAAGAGGAGGEGAPGDGGRDGRDASLPAA
LPSSVAPGAGSQLPALPPAQGRGQTAAAPPSARAVAGVAGAGAIAPAPAPTPAPTGQPIP
PDPQPLTAPPPAQQRTLGDRFRRLFGVTPTHVDPSWRPIEGDPVPAGWSAPGWAERDGKA
VPVPEAGREVMPGTVTAPPLDGGHEVAPPAESAPPGAPPAVPAAGQPQAPAAAAPPLPAT
PTRPPGAAVRRPTQPPPLARAPRTAEEAAAGAPIAQAGEVEAARTAGEQAVPPPSEAAIV
RDPGERYALTNPAPLPGAPVGGSAPAGGNQAAPAGAPAPNLGRPSAPQQPPGAVTGGAGA
APETGANAGPAGGDRGPGAAPGPAQPGTPARPPGLAAQPRSAGRAGAPAAPGAAQPEGQP
GPSAQVPQQPRGDWRLPENRPQGGGWIGPSIRRQEHGPAAGTPMEGGAVSPELTRPGRGA
GGRVPPGVMGAQEGAPGSQPGIGRVAFSPGANGGVSQAPQLSPPGAGGGAGNGAPIGSLS
ARFESARAGATAIGRDSTGGWSYGTYQFASARGSVEPFLATLRREAPDIAARLDAAGGSR
AALAGTAQFRQAWQQAATDPRFAGIEHAHIQATHYNPLARTAGELGIDLQGRSAALRDVV
WSTAVQHGPGRSLNSSRGPTGGASVLQDAVRSLGARTPEQVARLTDEQISQAIYAQRRTR
FSNSTPNERASVMRRFDQEGALALRRIGEERAAIAAAPQVPRPEAAAGAAQGGAQAMPPG
AAMAVPPGAPRPPGPAIVPPGAPRPPESAIVLPAAAHAPQPAADLPQAPTGMPSPEPATA
ASGAVPSPGYGTALPPEERARLAEQGSPGMAGAGAGAQQISVSTSANIAPLRVVHETDKG
EDRGEEFLPVTAYEAPKAWGASA
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggtcgggtatctatcgggatcagcgccgatccaagcggtgcgacccaggcgttt
tcgcaaatccaggcggccatcaaagcggccggcctcgaaggcaagcggctcgcggaagtg
ctggcgtccgcgcacccggccctcgcgccggtgcgcgacgacttgcagcggatgcaggcg
cagctcgaacagctccggcgcgcccgcggcgataccggcgctgctacccggcagatcacg
cacgaggcgggcggtccggagcacgtcgatgtcctcaatctgcgtgatcgcgcggcccaa
atcttcgctgaccagcgggacctgcggcgttacgaggcgaatgccggcgcgttcctgatt
cgcggcacgcaatgggcgcctcctccatccccaggcccaagcccagcgccgggccagccc
gatccgcagcatcagacgcgcactggctggctctacggcctcgatacgtggctctcccgc
cgcctgggcatgaccggccgcggcagtggtggtggcggcggtggcggtggcgggagcgga
gggggcgaggagggaggcaccgacaaggggctcctgtccggcatcctcgacatgggcggc
gccggcggactgctgaaggcgacgaagttcgggttggcgctggctggcatctcggcgctg
ggcggtatggccgtgaaggggcttggcaacgcccaggacgaggcggtttccaacgatcgc
ctgtccaagaccctgcgcgatgctgggactgatttcgagacgcttcgccggcaggtccgc
gatacggccgacgctttcgggctgaccttccaagaggcccagagatacagcctggaatgg
gcgcggctcaccaacgagacgagcggcagggcgacgcaggctggcgtgagctgggcagcc
ggtgtcgcgcgctcctacggccaggacccgggcgaggtggtgcagggcctgggccgcgcc
gccaagcagggggaggatccgcggcgcttcgccgccctggtgggcgaggcggtgcgcgag
agcggcatgacaggccgcttcggcgaggtcatggacgccctcgtgcgctggaccgagcag
agcaaccgccagctcgccgaccgcagcaacgtcgatctgttcgcgggcatgtattcctcg
ctctcctccctgggccggcccggcttgcaggggcagggagcagaggacgttctgaaccgc
atcaacgcggtgctgacgcagggtggcggcgccggcgaggcgtcgcggcatctgacctat
cgggcgctgacccgcgccggtgtcacggacccctgggagtggcagcggatcgaggagggc
ggcatgttcgcccgcatccgccggcgccggaatgagcggggcgagcttgaggacgatccc
accgcgccgacgctgttcgaggcgaagtgggaagaagcgaaccgcatgtacacagggcgg
ccggagacgccggcgcccaggacggagacgcagcagcaggcgaaccggcggcgcgcgggc
atcgcgcgcgacatgggcctgaccatccggcaggtcgaggctttcgagcaggccgcgccc
ggcggtgacatcggccgactgttcccgaccatcgagcgtgccggcatttccatgtcggac
gtgaaccctggcgctctacagccgctcatcacgctggccggggagaaccgggagcagatg
gaggcccgccggcggggtctcctcgaagattccaccatcgcgcttccacccgagcggcgc
gaagcattgcagcgcgcgggcacagatgacgagctgcgcaccgctctcgcccaggccatc
aacgcccgcgggctcgaagccaacgatggcacgcgcaccgtcgaagcgatggcctcgttc
agcaacacgctgacgggggccatgacggggctcgtcgcccccatcaacgatctgaagacc
gtaatcagcgccattgcccgcccgctcacgcgcatcagcgaggcgctgggcgagggctac
aaccgccccccgatcgaagcggtccagggggccggtcagaagctgggatcgtggctgcgg
gagtggtggaacggcaagggcgaggacaagccggcgtcgccgcccggcgtcacagctccg
gccgcgatcgccggccagccgggggcagcgcagccttccgccatcccatcctggcagcgc
ccggcaggccagggcgggcaggcgcagcaggtcccgcccgtcacgcggccgcgccagctc
ccgcctctctcggctgacgagctgcgcgcccaggggatcgaggttacggagggcgcgctg
ccggagagcgagcgcggggaggagccgatcccgctcgtcccgcagcgtccccgggaggag
gagaaggaggagccggagactccgcaggcgcgtgcaacgcgagaggacatcagccgcgcc
ttccaggctgcgctttccccgcgtgcgtcggctcgtcccgccaccgtcgctcctccggag
cctatggcgccgcagcggccgcgcgcccaggcggaggcgccggcggaggaggagcggccc
gccccggcttctgagctgccgggcaagccggatgttgtgccggtgccgccggccagcccc
ctgccggagccgaacgagcgcccgccgcacccgcccttggtcgagcgtccgcctgcgccg
ccggagggcgagccgttgccggaggggccggcggcgctgccgactgtcccgccgcagtcc
gcgcccgagccgcccgagccggcggagccgcaggcgattcctccgcgcgagccggccgac
ctgccgcagccgcttccgacgctcccgccgccggagcggccggattggtacgtgccgatt
cctccgccagagcgcgcggcagtcccgccattgccgcctccgccgccgcccgggccggag
ccgttggccaccgtgccgccgatggggctggtcgaggggccgccccgcggcgagccaacg
gcgatcgagccgcgccggccggccccgccgccaaacgtcagcgtcaacgtgaccgtgccc
cctcccgcgccgggcacgcaggcccctgcatctctggtcggggccgtgtcgtcgcagccg
gaggcgcgccgcgaagcggtgccggtgccgcccgttgtctctcagaacccgggggaaatg
agaggcaacgagcctcgcgtctcgccggatcccagcaacgctggcgcggcgccggcggcg
tctccggctgtcgaggcgcccggttcggttgacgggcgggggcggcaggttgacgcgctg
ggccgtccggtcggcgggccggctccggccgcggggcaggtcgcgccttctcccgggcaa
tcgaccgccggtgccctgccgcagcagccgcccgcggtggtgccgggcgcgcaggctgga
acgggcgtcggccctgtttttcgccccggtgctggcgctggcgccggtggcgcgggtggt
gttggcggcgccggtggtgctggcgcgccgggtgagagcggccgcgatgggcgcgacgct
gcccaggcgccggccggccgccctggcgtgcaggcgattccgcccgcgccgctcccgctg
actgtcccgccggcgatgccgggtgcccctggtgctggcggcgccggcgggcaggcgatt
ccgccagggccgccgcctctgactgccccgccggcggcgccgggcgcccctggcgctggt
ggcgccggcggtgccggtggcgaaggcacggcagggcgggacgggcgcaatgcggcgccg
gggggcgctggtgctggcgcgcgggcaatcccgcccgggccggttcctctggcggcccca
ccggcggcgccgggtgttggtgggacgacgccggccgcgcctggggcgcccacgcgacac
ccaggaatagtgccgaccgcgccggtgggggctggcgcagctcctgttctcgaaccgggt
gccggtggtgccggcggggagggcgtggcgggccagagcgggcgcgacgccgcctcggcg
ctggccggcgcccccggcgcgcaggcaattccgcctgggccatccccgctgactgtcccg
ccggcggcatcgggtgttggtggggcgacgccgaccgcgccggcggaggttggccgccct
ggcgcgcagccggtcccgcccggttcgcaaccccagcaacccatgactgccccgccggcg
gcgccgggggccgcgcccgttctcaggccgggcgccggcggcgccggcccccaggtgatc
gggccgcaacctctttctgcgccgcccgtggcgccggaagtcggccgcggcggtgctggc
ccagccgctggtgctggtgctggcggtgccggtggcgccggcgcccagggcggcgagggc
ggatccggcgctgtcggccccgctggcgagcgcggccccggcgcggtgtccggctatccg
ccggcatctgtccggccgtcgtccgacattatccgccgcgccgatcagggatacgcacgt
cagccgggggcgcccggggccgatggggggcagaatgcgcccctgccggcttctccggcg
cctattctgcctccccctgccggcggcgctgtcgcgccgctcccgcgtcggccttcgcgc
gtgccgcgccagggcgaggagccgcagactccaagcgccgccggtgcgggtggagctggt
ggtgaaggcgcgcccggtgatggcggccgcgacgggcgcgatgcttcgcttcctgccgct
ctgccgtcctctgtcgcgccgggtgcgggctcgcagctccctgcgttgcctcctgcccag
gggcgtgggcagactgcggcggcgcctccctccgctcgtgcggtggctggcgtcgccggc
gccggagcgatcgcccccgcgcctgctccgacaccggcgccgaccggtcagccgatcccg
cctgacccgcaacctctgactgccccgccgccggcgcagcagcgcacgctcggcgatcgc
ttccgccgcctgttcggcgtcacgccgacgcatgttgatccgtcctggcgaccgatcgag
ggcgacccggtccccgccggatggagcgccccaggctgggcggagcgcgacggcaaggcc
gtgccggtcccggaggctggccgcgaagttatgccggggaccgtcacggcgcctcctctc
gatggcggccatgaggtggcgcccccggcagagtccgcaccgcccggcgcgcctcctgcc
gtcccggcagccggccagccccaggcgccagccgcggcggctccacctctccccgccacc
ccgacccgcccgccgggcgcggccgtgcgccggccgacccagccgccgccgctcgcgcgc
gcgcctcgcaccgcggaggaagccgccgccggcgcaccgatcgcccaggccggcgaggtc
gaggccgcgcgcactgctggcgagcaggccgtcccgccgcccagcgaggccgcgatcgtc
cgcgacccaggcgaacgctatgccctgaccaacccggccccgctgccgggcgcgccggtg
ggaggttcggcgccggcgggcggaaatcaggccgcgccggcgggcgccccggccccgaac
ctgggccgccccagcgcgccccagcaaccgcctggggcggtgacgggaggcgccggcgca
gcgcccgaaactggcgcaaatgctgggcctgccggtggtgatcgaggccccggcgcagcg
cccggcccggcgcaacccggcacgccggcgcggccgcccgggctggctgcgcagccgcgc
tccgctggtcgagctggcgcaccagccgcgcccggcgcggcgcagccggaggggcagccg
gggccgagcgcccaggtgccgcagcagcctcgcggcgattggcgcctgcctgagaacagg
ccgcagggaggcggctggatcgggccgtccatccggcgtcaggaacacgggccggcggcg
ggcacgccgatggagggcggcgctgtttctccggagctgacgcgcccggggcgtggcgcg
ggcgggcgcgtgccgccgggcgtaatgggcgcgcaggagggcgcgccgggttcgcagccg
gggattgggcgcgtcgccttctctcctggcgccaatggcggggtgtctcaggcgccgcag
ctctcgccccccggcgccggcgggggagccggcaacggcgcgccgatagggagcctgtcg
gccagattcgagagcgcgcgcgccggcgccacggcgatcggccgggacagcaccggcggg
tggagctatggcacctatcaatttgccagcgcgcgaggctctgtcgagccgttcctggca
accctgcggcgcgaggcccccgacattgctgcgcggctcgatgccgccggcggcagccgg
gcggcgttggcagggacggctcagttccggcaggcgtggcagcaggccgcgaccgacccg
cgcttcgccggcatcgaacacgcccacatccaggccacgcactataacccgctggcgcgc
accgctggcgagctgggcatcgacctacaggggcgcagcgccgccttgcgtgacgtggtc
tggtctacggccgtgcagcacgggcctggacggagcctgaatagcagtcgggggccaacc
ggcggcgcgagcgtgctgcaagacgcagtccggagcctgggcgcgcgcaccccggaacag
gtcgcgcgtctgaccgacgagcaaatctcgcaggccatctacgcgcagcgcaggacccgc
ttcagcaactccaccccgaacgagcgggcgagcgtcatgcggcggttcgaccaagagggg
gcgttggcgctccgccggatcggggaggagcgggcggccatcgctgccgcgccgcaggtc
ccgcggccggaggcggcggccggagctgcgcaagggggcgcccaggctatgccgccgggc
gccgccatggctgtcccccctggcgctcctcgtcccccagggccggcaatcgtcccgccg
ggcgccccccgcccgccggaatcggcaatcgtcctgccggcggccgctcatgcgccgcag
cctgctgccgatctgccccaggccccgaccgggatgccgtcgccagaaccggcaaccgcg
gcatctggggccgtcccatcgccgggttacgggaccgcgctcccgccggaggagcgcgca
cggctggccgagcagggctcgcccggcatggccggcgccggcgctggtgcgcagcagatc
agcgtctccacgagcgcgaacatcgccccgctgcgcgtggtccacgaaaccgacaagggc
gaagaccggggcgaggagttcttgcccgtcactgcatacgaagcgccgaaggcgtgggga
gcttcagcataa
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