Rhodovastum atsumiense: RHOA_PF0036
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Entry
RHOA_PF0036 CDS
T08162
Name
(GenBank) DEAD/DEAH box helicase
Organism
rap
Rhodovastum atsumiense
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CAH2606384
LinkDB
All DBs
Position
RHOApf:29370..32909
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AA seq
1179 aa
AA seq
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MPTTIEAIQAEIEAAATPGFRGRLIARGQARAMIWRDGALPADAPAFSPQLSYDLHSYGY
SLLGLGLRLRDLGGDPARARIAFEQAATALEAVMAKGNRGDSDRDFHFVMAAAAYHLARL
SARAYSLLVIVLGESNFSPIERAIAQLMLRDFNALDDLVMSFRAYGTGSDERITAAFEAY
LNQDEPQAADGADSEHSSFILDGIDLALTDNFLAAMSIFRAALEHGEQALVNEALTRLRE
GQNICGELNLLPQWWAHRVAIHLLSDLWDSTFHVRLPANPSGGSAPLWPSLRELFIASLM
RRPRAEVDLWPSQIDAAVRAVNQTDDLVVSLPTSAGKTRIAELCILRCLASGKRVVFITP
LRALSAQTETALQRTFFPLGRTISALYGSVGVSGLDEDAIRERHIVVATPEKIDFALRND
PSLLDDVGLLVFDEGHMIGPGEREVRYEVQIQRLLKRSDASQRRIVCLSAILPDGDQLED
FANWLRRDQPGGLVKNDWRPTRLRYGEVTWNGQTALLSLRVGEERPFVPRFLTAFTPPLF
IRPKRQRTRVFPDDQRELCLATAWRLVEDGQTILIFCPERRSVEPFAEVIIDLHERGALK
SLLTIEPSKLATALALGQEWLGQGHAILRCLELGVALHHGALPTAYRKEVERLLREGVLK
VTISSPTLAQGLNLSATVVIMHSLFRRGELIEISEFKNVIGRAGRAYIDVEGLVLYPVFD
GDPYHLSQWDRLITNLGSREMESGLVRLVLELLVRMHNRTGGTLQQLADYVVNNPAAWTF
PEIPNEKPQIREHAFLSWQRNLATLDTAILSLIGENDIPDHSVEETLDRILQSSLWERSL
KRRPQDHQLVLKTAFVARSKVIWAQSTSVRRRGYFLAGIGLESGLALDAIAAECNELLVT
ANNAIFAFEAEDAIAAITSIAERVFSFYPFAPDPMPPNWRAILRCWLLGEPLAAVAADQE
SDTLQFVEGGLVYRLPWAMEAIRVRGIANGDIIDDTFGLRLEDYDLRFAVCAVETGTLNR
SASILIQAGFNSRIAAIKVVNDTGATFSTAAELNQWLGSEVVAAWSALPDWPTPETQVMW
ATFSRDFVPHEGNTWTSRRYWASVAWNSSTAPRSGTPVRLFHLDGRPAVLSVDGLPIGTL
KAPLNPNRRGLLRGVVGDEAGKILLTYLGPEDLWLKNIA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacgattgaagccattcaggccgagatcgaagccgcggctacgccgggattt
cgcggtcgcctcatcgcacgcggccaagcgagggctatgatttggcgcgacggggcgctt
ccagcggatgctcccgctttctccccccagcttagctacgacctccactcgtatggttat
tcactccttggactcggtctccgcctgcgtgacctcgggggtgatcccgcgcgcgcgcgc
attgcctttgagcaagctgctactgcgcttgaagcggtcatggccaaaggcaatcgtggc
gacagcgaccgcgactttcatttcgtcatggccgccgccgcataccatctcgcgaggctt
tcggcgcgcgcctattcgctactcgttatcgtgttgggagaaagcaatttctcgcccatc
gaacgtgccatcgcccagctcatgcttcgagacttcaatgcgcttgatgacctggtcatg
agctttcgagcctatggcaccggcagtgacgagcggatcacagcagctttcgaagcctat
ctcaatcaggacgagcctcaggctgctgatggtgctgattcagagcactcgtcattcatt
ttggatggtatcgaccttgcgttgacagacaatttcttggcggccatgtcgatctttcgg
gctgctctggagcatggcgagcaagctcttgtcaacgaggcgctgacgcgtctgcgggag
ggtcaaaatatttgtggagaactgaatcttttaccccaatggtgggcgcaccgggttgcc
attcaccttctttccgacctgtgggattcgacatttcacgttcggcttcccgccaacccg
tcggggggatctgcaccgttgtggccatctttgcgagaactcttcattgcatctctcatg
cgccgtccaagggccgaagtcgatctgtggccttcacagatcgatgctgctgtgcgggcg
gtcaatcagactgatgacctcgtggtgtcgcttcctaccagcgccggcaagacgcgtatc
gctgaactctgtattctgcgatgcctcgcttcaggcaagcgggtggtcttcatcacccct
ttgcgggcgctctcggctcagaccgagacagccttgcagcggacattctttcctttaggc
agaacgatctcggccctttacggtagcgtcggtgtcagcggcctcgacgaagatgccatt
cgcgagcggcatatcgtggttgcaacacccgagaagatcgatttcgcattgcgcaacgac
cccagcctgctcgacgacgtaggattgctagtgttcgacgaaggccatatgatcgggccc
ggcgagcgcgaggttcgctacgaggtccagattcagcggctgttgaagcgatcggacgcg
tctcagcggcgcatcgtctgcctttcggcgattcttccagacggtgatcagctagaggat
ttcgccaactggctgcgccgagaccagccagggggcctcgttaagaacgattggcggcca
acgcggctccggtatggagaggtcacttggaacggccagaccgcgttgctcagcttgcgg
gtcggcgaagaacgtcctttcgtaccacgcttcctgacagcgtttacgccacctttgttt
attcgccccaagcggcagcgaacgcgagtctttcctgacgatcagcgtgagctttgcttg
gccacagcgtggcgccttgttgaggacggccagactatcctgattttttgtccggagcga
cgcagcgttgaacccttcgccgaggtaatcatcgacctccatgagcgcggtgcgctcaag
tcgttgctcactatcgagccgtccaaactcgctaccgcattggccctcgggcaagagtgg
ctcggccagggtcatgcgatcctcaggtgccttgaactcggggttgcattgcatcacggg
gctttgccgaccgcctatcgcaaggaggtcgagcgtcttctgcgcgaaggcgtgctcaag
gtcacgatttcatcgccgaccttagctcaaggcctcaatctgtcggcgaccgtcgtcata
atgcattctctgttccgccgcggtgagctcatcgagatatcggagtttaagaacgtcatt
ggccgcgctggccgagcctacatcgatgtcgagggactggttctctacccagtttttgat
ggcgatccataccacctctcccaatgggatcggctcatcaccaaccttggctcgcgtgag
atggaaagtggtttagtacgtctggtgctggagctgttggtccgcatgcacaacaggact
ggtggcactttgcagcagcttgccgactacgtcgtgaacaaccccgctgcttggacattt
cccgagataccaaacgagaagccgcagattcgcgaacacgcatttttatcgtggcaacgg
aacctagccaccctagacacagcgattctgagcctgatcggggaaaatgatatccctgat
cacagcgttgaggagaccttggaccgcatcctccagtcatctctttgggaacgtagcctc
aagcgccggccccaagaccaccagctggtgctgaagaccgcattcgttgcccgcagcaag
gtcatatgggcgcagtcgacatccgttcgccgacgcggctattttcttgctggcattggc
cttgagagcggtctcgctctcgacgccattgctgcagaatgcaacgagcttctcgtgacc
gccaataatgccatcttcgcctttgaagctgaggatgcgattgccgcaattaccagtata
gccgagcgcgtgttcagcttctatccctttgcgcctgatcctatgccacccaattggcgg
gcgatcttgcgctgctggttgcttggtgagccgctcgcagccgtcgccgctgaccaggaa
tctgacacgctccaattcgtcgagggcggattggtatatcggctgccatgggcgatggaa
gcgatccgggtgcgtggaatcgcaaacggcgatattatcgacgatacattcggcctgcgc
cttgaggattacgatctgcgttttgccgtttgcgccgtggagaccggcactctcaatcgt
tcagcttcaatattgattcaagcaggattcaattcccgcatcgcggcaatcaaagttgtt
aatgataccggcgccaccttttctaccgcggccgagcttaaccagtggttaggttcggaa
gttgtggcggcttggagtgcgttgcctgattggccgacgcctgaaacgcaggtgatgtgg
gcgaccttcagccgggattttgtgcctcatgaaggcaacacctggactagtcgacgctat
tgggcttcggtggcgtggaattctagcaccgcgccgcgctcaggcacacctgtccgtcta
tttcacctggatggccggcctgcggtgctgtctgtcgacggtctgcctatcggcacgctg
aaagcgccgttgaaccccaatcggcgtggcctcctgcggggagtggtcggagatgaagcc
ggaaaaatcctgctgacgtacctcggtcctgaagatctctggctaaagaatatagcttag
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