Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0003
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Entry
Rahaq2_0003 CDS
T01770
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03030
DNA replication
raq03430
Mismatch repair
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rahaq2_0003
03430 Mismatch repair
Rahaq2_0003
03440 Homologous recombination
Rahaq2_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raq03032
]
Rahaq2_0003
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_0003
Enzymes [BR:
raq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rahaq2_0003
DNA replication proteins [BR:
raq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rahaq2_0003
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rahaq2_0003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AEX49957
UniProt:
H2IZP8
LinkDB
All DBs
Position
1885..2985
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTDGALSLTGTDLEMEMVAKVALS
QPHEAGATTVPARKFFDICRGLPEGAEISVALDGDRMLVKSGRSRFSLSTLPATDFPNLD
DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQSLPSHSVIVPRKGVMELVRLLDGGDTTLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLQAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVGYEGTEMEIGFNVSYVLDVLNALKCEDVNLLLTDSVSSVQIEDAASQSAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttgaacgtgagcatttgctgaaaccactgcaacaggtcagtagcccg
ctgggtggacgaccaacgttgcctattctgggtaacctgttattacaggtaacggatggc
gcgctgtcgctgaccgggacggatttggaaatggagatggtggcgaaagtcgcgctgtct
cagccacatgaagcgggtgccaccacggtgccggcgcgtaaattctttgatatttgtcgg
ggattgccggaaggcgcggaaatttccgttgctctcgacggcgatcgcatgctggtcaaa
tcaggccgcagccgtttctcgctgtcgaccctgccggcaacagatttccctaatctcgac
gactggcaaagcgaagtagaattcaccctgccgcaggctacgttgaagcgtctgatcgaa
gccacgcagttttctatggcgcatcaggacgttcgttattatttaaacggtatgctgttc
gaaaccgaaggtgaagagctgcgtactgttgcgaccgacgggcaccgtctggctgtgtgt
tctatgccaatcggtcagtctctgccgtcacattcggtgatcgtaccgcgaaaaggtgtg
atggaactggtgcggctgcttgacggcggtgacaccacattgcaactgcagatcggcagc
aacaatatccgtgctcacgtcggcgacttcatctttacctccaaactggttgacggtcgt
ttccctgattatcgccgcgtattgccgaaaaatccggataaaacgctgcaagccgggtgc
gatttgctgaaacaggcgtttgcccgtgcggccatcctgtccaatgaaaaattccgcggc
gtgcgtttgtatgtcagccataaccagctgaaaatcaccgcaaataacccggaacaggaa
gaagcagaagaaattctggatgtcggctacgaaggcactgaaatggaaatcggctttaac
gtcagttacgtcctggatgtgctcaacgcgctcaagtgcgaagacgttaatcttctgctg
acagactccgtttccagcgtacagatcgaagatgctgcgagccagtcagcggcgtacgtt
gtcatgcctatgaggctatag
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