Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0004
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Entry
Rahaq2_0004 CDS
T01770
Name
(GenBank) recF protein
KO
K03629
DNA replication and repair protein RecF
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rahaq2_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_0004
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rahaq2_0004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_27
AAA_16
AAA_29
ABC_tran
AAA
AAA_22
Aq_aa27
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AEX49958
UniProt:
H2IZP9
LinkDB
All DBs
Position
2995..4083
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AA seq
362 aa
AA seq
DB search
MALTRLLIKDFRNIEAADLDPSPGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGRV
IRHDQPEFVLHARVDDGGDRELSIGLSKSRQGDSKVRIDGSDGHKVSELAQMLPMQLITP
EGFTLLNGGPKYRRAFIDWGCFHHDPGFFIAWSNLRRLLKQRNAALRQVGRYAQIRAWDQ
ELIPLAERISEWRAAYSEAIAADISATCAQFLPEFALSFSFQRGWDKETEYGELLERNFE
RDRALTYTASGPHKADFRIRADGTPVEDLLSRGQLKLLMCALRLAQGEFLTRQSGRRCLY
LLDDFASELDADRRRLLADRLKATQAQVFVSAISAEQVTDMMGEKGKMFRVEQGKIAVLS
QD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacgcgcttactgataaaagatttccgcaacatcgaggcggcggatttagat
ccgtcgcccggttttaactttctggtcggtcccaatggcagcggtaaaaccagcgtgctc
gaagcggtctatacgctggggcatggccgcgcttttcgcagtttgcaggccggacgcgta
attcgtcacgatcagccggagtttgttctccatgcgcgtgtggatgacggcggtgatcgt
gaattgtcgattggtctgagcaaaagccgtcagggcgacagtaaagtacgcattgatggc
agtgacggccacaaagtatctgaactggcgcagatgctgccaatgcaacttatcacaccc
gaaggcttcaccctgcttaatggcgggccgaagtaccggcgggcgtttattgactggggt
tgttttcatcacgaccccggtttttttatcgcctggagcaacctgcgacggttactcaag
cagcgcaacgccgcgctgcgacaggtgggtcgttatgcgcaaattcgtgcctgggatcag
gaactgatcccgttagccgaacgcattagcgaatggcgggcagcctacagcgaagcaatc
gcggctgatatcagcgcgacctgcgcgcagttcctgcccgaattcgccctcagtttttct
ttccagcgtggatgggataaggagactgagtacggtgagttgctggagcgtaattttgaa
cgcgacagagctttaacgtataccgcatcaggcccgcataaagcggatttccgcattcgt
gccgacggcacgccggtggaagatttactgtcccgtgggcagctgaagttactgatgtgt
gcgctgagactggcgcagggtgagtttctcacccgacagagcgggcggcgttgcctgtat
cttcttgacgattttgcctctgagcttgacgccgaccgacgtcggttgctggccgatcgc
ctgaaagccacccaggcacaggtttttgtcagcgcgataagcgctgagcaagtgaccgat
atgatgggtgaaaagggcaagatgttccgcgtggaacaaggtaaaatagccgttctatca
caggactaa
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