Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0699
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Entry
Rahaq2_0699 CDS
T01770
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
raq03016
]
Rahaq2_0699
Enzymes [BR:
raq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Rahaq2_0699
Transfer RNA biogenesis [BR:
raq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rahaq2_0699
Prokaryotic type
Rahaq2_0699
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEX50625
UniProt:
H2IV96
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All DBs
Position
747020..748069
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AA seq
349 aa
AA seq
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MIDMSRLTWLLGKPVATGQLKANPEDFIVEEDLGFEPDGEGEHLLVRIRKNGCNTQFVAE
QLARFAKVHPRDVSYAGLKDRHAVTEQWFCLHLPGKTDPDLSQFDLEGCEVVRASRHRKK
MRIGTLKGNAFTLVLRQLSDIADVEARLEKIARQGVPNYFGTQRFGRGGNNLVQAKRWAT
NEARPKERAKRSFYLSASRSAMFNIVASQRLAEGAVRQPMLGDALQLSGRGSWFVAKGEE
FESLLPRVESGELLVTAPLPGDGPLGTLEDAEAYEQACLHGQGDLLSLLKRERVEPARRA
IMLQPLQMQWQRWDDVTLELKFWLPAGSYATSVVRELMNLDESDADITE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatagatatgtcccgactcacctggttactgggcaaacctgtcgccaccggccagctg
aaagccaatccggaagactttatcgtcgaagaggatctgggttttgagccggacggcgaa
ggtgaacatctgttggtgcggatccgcaaaaatggctgtaacacgcagtttgtcgcggag
caactggcgcggtttgccaaagtgcatccgcgcgatgtcagttatgccggtctcaaagac
cgccatgcagttaccgaacaatggttttgcctgcatctgccgggcaagacggatcccgat
ttaagccagtttgatctcgaaggctgcgaagttgtccgcgcttcacgccatcgcaaaaag
atgcgaatcggcacgctgaaaggcaacgcgtttacgctggtgctgcgtcagttaagcgac
attgctgatgtcgaggcgcgtctggaaaaaatcgcccgacagggcgtgccgaactatttc
ggtacccagcgttttggccgtggtggcaataatctggtgcaggcgaaacgctgggcgacc
aacgaagcccgtccgaaagaacgcgcgaagcgcagcttctatctttccgccagccgcagt
gcgatgttcaatatcgtcgccagccagcggctggcagagggggccgtgcgtcagccaatg
ctcggggatgccctgcaactcagtggtcgtggcagctggtttgtcgcgaaaggggaagag
ttcgaatcgctgctaccgcgcgttgaaagcggtgagttgctggtaacggcaccgttaccg
ggggatggcccgctgggcacactcgaagacgccgaagcgtatgaacaagcctgtctgcat
ggtcagggcgatttactgtcgctgcttaaacgtgagagggttgaaccggcacgtcgtgcc
atcatgctgcaaccgttgcagatgcaatggcagcgctgggatgatgtcacgctggaactc
aaattctggttaccggccggcagttatgccaccagcgtggtgcgtgaactgatgaatctg
gatgaaagtgatgcggatattactgagtaa
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