Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_1061
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Entry
Rahaq2_1061 CDS
T01770
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rahaq2_1061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_1061
Enzymes [BR:
raq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Rahaq2_1061
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rahaq2_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEX50953
UniProt:
H2IZ40
LinkDB
All DBs
Position
1094984..1098445
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AA seq
1153 aa
AA seq
DB search
MNSGLMVLHGNHSEALRDVLITWMAAHPLSPLENEVILVQSNGINQWLKLALARDVTDGG
CGIAAALDIKLPARFFWQVYRAVLGKEQVPESSPFDRPLLTWRLMRLLPELLAEPVFAPL
ARFLKDDGDMRKLHQLAQRLADLFDQYQVYRADWLEDWGNGLDVLRTSRKGSEPLPENLL
WQPQLWRALLADVPESERGTSRAAVHQRFLQYAQSIPEGQRPAGLPARLVVFGISSLPQQ
SLEVLAMLGRWTHIFMCVHNPCEHDWSDIIADKDLLRAERVRQQRKPGMPQVIAEDELHQ
HAHPLLAAWGKQGRDYIGLLNEYDNHESYASQLAPVIPRIDLFTSNGTDTLLHQLQEDIL
QLRPLSETIDQWPAVDVQHDDSLRFFITHSAQREVEVLHDRLLAALAADPTLKARDIIVM
VPDINGYAPHIQAVFGLMERSDPRYIPFTVADQGPRQNNPLLGALESLLALPQSRFAVSD
LLDLLDVPSVRQRFGIEEEQLPLLHRWIRAANVRWGLHAEQRQSLELPLSPEQNSWFFGL
QRMLLGYAVGSGEAWENIEPLDEIGGLDAALMGPLSHLLNCLDDTWRQLREPAAPLVWGE
RLRSILSQYFADDDGEDGFILVRLLGELEIWLEACESVDLQAELPLSVVRDHWLAQFEQS
GLTQPFFGGAVTFATLMPMRAIPFRHVYLLGMNDGDYPRNRVPMDFDLMGRDYRPGDRSR
REDDRYLFLEALLSARERLHISWVGRSIHDNTERPPSVLVAQLRDHLAAGWGRNKGKEFL
AALTTEHRLQPFNRDYFSQGSPLFSYAHEWRAGLEAEAAAVATQPLQPAEQEGALTLRQL
SDFLSDPVRSFFRQRLNIWFELEDPGSEDQEPFDINALENWRLQDELIRAQKWALETGVS
RQDVLRQQLERIERRGELAPGEFAAVLSEDLAEPMDTLFASYQQILDVWPQPLANEALED
GTGGVMFSDWLSELRANPAGDRARVVLESIGIMTKERSYRFDRLLPYWVAHLAGHLDGKP
MHTVIISKNGTAELLPLEIAQARALWEMLIETWKAGQLRPLPLAVKTAFVWLKKEGTENS
TPDSDAWLSARDSYENHDPANMKFGERDSNRYLSRAWPDFAALWSDGEFARLADTLLAPL
RNHLSRGKKGTKE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcaggtttgatggtattacacggaaatcactcagaagcgctgagggacgtgctg
atcacgtggatggcggcgcatccgctgtcgccgctggaaaatgaagtgattctggtgcag
agcaacggcattaatcagtggctgaaactggcgctggcacgtgatgtgaccgacggtggc
tgcgggattgctgcggcgctggatatcaaacttccggcgcgctttttctggcaggtttac
cgcgcggtgctcggcaaagaacaggtgccggaatcatccccgttcgaccgcccgctgctg
acctggcgactgatgcgcctgttgcccgaactgcttgccgaaccggtgtttgcgccgctc
gcgcgtttcttaaaagatgacggcgatatgcgtaaactgcatcagctggcacagcgcctg
gcggatttattcgatcagtatcaggtttaccgcgccgactggctggaagactggggcaac
gggctggacgttctgcgtaccagccgtaaaggcagcgaacccttgccggagaatctgctg
tggcagccgcaactgtggcgcgcgctgctggcggatgtccctgaaagcgaacgtggcacc
agccgtgcggcggtgcatcagcgtttcctgcaatacgcgcaatctattcctgaaggccag
cgtcccgccgggcttcccgcgcggctggtggtctttggtatttcctcgctgccgcaacaa
tcccttgaagtgctggccatgctcggccgctggacacatatctttatgtgcgtacataac
ccatgcgagcacgactggagcgatatcatcgcggataaagatttgttgcgcgcggaaaga
gtacgtcagcagcgcaaaccgggcatgccgcaggtgattgccgaagatgaactccatcag
catgcgcatccgctgctggcagcatggggcaaacaggggcgtgattacatcggtctgctg
aatgagtatgacaatcatgaatcttatgcctcgcagctggcgccggtgatcccgcgcatc
gacctctttacctcaaacggtaccgacaccctgttgcatcagttgcaggaagacattttg
cagctgcgtcctctgtccgaaaccatcgatcaatggcctgccgttgacgttcagcatgac
gattccctgcgtttctttattacgcacagcgcccagcgtgaagtggaagtgctgcacgac
cgcctgctggcggcactggccgctgatccgacgctgaaagcgcgcgacattatcgtgatg
gtgccggatatcaacggttatgcaccgcacattcaggcggtgtttggcctgatggagcgc
agtgatccgcgttatatcccgtttaccgtcgccgatcagggaccgcgccagaacaacccg
ttactcggtgcgctggaaagcctgctggcgctgccgcagtcgcgttttgcggtcagcgat
ttgctggatttactcgatgtgccatcggtgcgtcagcgcttcgggattgaagaagaacaa
ctgcccctgctgcaccgctggatcagagcggctaacgtgcgctgggggctgcatgccgaa
cagcgtcagagcctggaactgcccttatcgccggaacaaaacagctggttctttggcctg
cagcgtatgttgctgggttatgcggtaggcagcggcgaagcctgggaaaatattgagcca
ctggatgaaatcggcgggctggatgcggcgctgatggggccgctgtcacatctgctgaac
tgcctcgatgacacctggcgtcagttgcgtgaacctgcggcaccgctggtgtggggggaa
cggctgcgctccattctttctcaatattttgccgatgatgacggcgaagacggctttatt
ttagtgcggctgctcggcgagcttgaaatctggctcgaagcctgtgaaagcgtcgatcta
caggctgaactgccgctttcggtggtgcgtgaccactggctggcacagttcgaacagtcg
ggtctgacccagccgtttttcggcggcgcggtgactttcgccacgctgatgccgatgcgt
gccattcctttccgccatgtgtatctgctgggtatgaacgacggggattatccgcgtaac
cgtgtgccgatggatttcgacctgatggggcgcgattaccgtccgggcgaccgttcacgt
cgcgaagatgaccgctatctgttccttgaagcgctgctttccgcgcgtgagcgcttacac
atcagctgggtgggtcgcagcattcacgacaataccgaacgcccgccgtccgtgctggtg
gcgcagttgcgcgaccatctggcggcgggctggggaagaaataagggtaaggagttcctg
gctgcgctgaccaccgaacatcgtctgcaaccgttcaaccgtgactacttcagtcagggc
agcccgttgttcagctatgcgcacgaatggcgcgccggactggaggcggaagctgccgcc
gttgctacacaaccgctgcaaccggcagagcaggaaggcgcgctgacgctgcgtcagttg
tcggatttcctgtcggatccggtgcgcagtttcttccgccagcggctgaacatctggttt
gagctggaagatccgggcagtgaagatcaggagccgtttgacatcaatgcgctggaaaac
tggcggttgcaggacgaactgatccgtgcgcaaaaatgggcgctggaaaccggcgtttcg
cgccaggatgtgttgcgtcagcaactcgaacgtattgagcggcgcggcgagctggcgccg
ggcgaatttgccgccgtgctgagtgaggatcttgctgagccgatggacaccttattcgcc
agttatcagcagattctggatgtatggccgcagccgctggcaaatgaggcgctggaagat
ggcaccggtggtgtgatgttctctgactggctgagcgaactgcgggcaaatcctgcgggt
gaccgcgcgcgcgtggtgctggaaagcatcggcatcatgaccaaagaacgcagttaccgt
tttgaccggctgctgccttactgggtcgcccatctcgccggtcaccttgacggcaagccc
atgcacaccgtgatcatcagtaagaacggcacggctgaactgctgccgctggagattgca
caggcgcgtgccctgtgggaaatgctgattgaaacctggaaggcggggcagttgcgcccg
ttgccgctggcggttaaaaccgcatttgtctggctgaaaaaagagggcacagaaaacagc
acaccggacagcgatgcctggctttccgcccgcgacagttatgaaaatcacgatccggca
aacatgaagttcggtgaacgcgacagtaaccgctatctgtcccgcgcgtggccggacttc
gccgcactctggtctgacggtgaatttgcccgcctcgcggatacgctgctcgcgccgctg
agaaatcatctttcccgcggtaaaaaaggaacgaaggaatga
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