Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_1414
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Entry
Rahaq2_1414 CDS
T01770
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rahaq2_1414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_1414
Enzymes [BR:
raq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Rahaq2_1414
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rahaq2_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CFAP58_CC
Motif
Other DBs
NCBI-ProteinID:
AEX51293
UniProt:
H2IPX6
LinkDB
All DBs
Position
complement(1489883..1490749)
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AA seq
288 aa
AA seq
DB search
MKFVGAHVSAAGGVDQAVLRAHELEATAFALFTKNQRQWKAAPLPEDVIEKFKVACEKYG
YQSHQILPHDSYLINLGHPVTEALEKSREAFLDELQRCEQLGLSLLNFHPGSHLMQIEED
KCLALISESLNIALDKTKGVTAVIENTAGQGSNLGFRFEHLAKIIEGVEDKSRVGVCIDT
CHAFAAGYDLRTVEECEKTFKHFDEVVGFKYLRGMHLNDAKSAFNSRVDRHHSLGEGNIG
NTVFSWIMKDARFDGIPMILETVNPDIWIDEIAWLKAQQKSENDEAAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtgggagcacacgtgagtgcggccgggggtgtcgatcaggcggttctgagg
gcacacgagctggaagccacggcttttgcgcttttcaccaagaatcagcgccagtggaaa
gccgcaccgttgccggaagacgtcatcgaaaaattcaaagtggcttgtgaaaaatacggc
taccaaagtcatcagattttgccgcacgacagctacctgattaacctcggtcatccggtc
accgaagcgctggagaaatcccgcgaggcgttccttgatgagttgcagcgttgcgaacaa
ctgggcctgtcgctgctgaatttccatccaggcagccacctgatgcaaatcgaagaagat
aaatgtctggcgctgatttctgaatctctgaacattgcgctggataaaaccaaaggcgtg
acggcagttatcgaaaacaccgccggtcagggcagtaatctcggcttccgcttcgagcac
ctggccaaaattattgaaggcgtggaagacaaaagccgcgtcggcgtctgcattgatacc
tgccatgccttcgctgcgggttacgacctgcgcacagtggaagaatgcgagaaaaccttt
aagcactttgacgaggtggtcggttttaaatacctgcgcggtatgcacctcaacgatgcg
aaaagcgcgttcaacagccgggtagaccgccaccacagcctcggtgaaggcaatatcggc
aataccgtatttagctggatcatgaaagatgcgcgtttcgacggcatcccgatgatcctc
gaaaccgtcaatccggatatctggatagatgaaatcgcctggctgaaagcgcagcagaag
tcggagaatgacgaagccgcagcttaa
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