Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_2150
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Entry
Rahaq2_2150 CDS
T01770
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
raq03016
]
Rahaq2_2150
Enzymes [BR:
raq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Rahaq2_2150
Transfer RNA biogenesis [BR:
raq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rahaq2_2150
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
FPL
Motif
Other DBs
NCBI-ProteinID:
AEX52011
UniProt:
H2IXY6
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All DBs
Position
2262559..2263680
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AA seq
373 aa
AA seq
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MNYQLITTNDALEQVCLQAKAHSKIALDTEFVRTRTYYPQLGLIQLFDGERLTLIDPLPI
TAWQPFIDLLVNPDVIKFLHAGSEDLEVFLNAFGVMPSPLIDTQILAAFSGRPLSCGFAR
LVAETTGVELDKSESRTDWIARPLSEKQCVYAAADVWYLLPLADQLMRETQEAGWMDAAL
DECLALCRRRKEVLQPELAYLEISNAFQLRPRQLGCLKLLAAWRLNQARQRDLAVNFVVR
EENLWQVARYQPTSLGELEALGLSGPEIRYHGRTLLALVDESNALDETELPAPILNLIDQ
PGYRKVFKDIKALIQTVSEESKLSVEMLASRRQINQLLTCHWKLKDKESQPELISGWRGK
LLAERLNDILSNY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcaccaccaatgacgcgctggagcaagtttgtcttcaggccaaa
gcgcacagtaaaattgcgctggataccgaatttgttcgcacccgcacttactatccgcaa
ctggggcttatccagctattcgatggcgaacggctgacgctgattgaccctttaccgatc
accgcctggcagcctttcatcgatttgctggtcaatcctgatgtcatcaaattcctgcat
gccggcagtgaagatctggaagtgtttctgaatgcttttggggtgatgccttcaccgctg
attgacacgcagatccttgccgcgttcagcgggcgcccgttgtcctgtggttttgcacgt
ctggtagctgaaactaccggcgttgagctggataaaagcgaatcgcgcacggactggata
gcccgtcctttgagcgaaaagcaatgcgtttatgccgcggctgacgtgtggtatttactg
ccgctggccgatcagctgatgcgtgaaacacaagaagcagggtggatggacgccgcgctg
gatgaatgccttgcactgtgccgccgccgtaaggaagtgctgcaaccggaactggcttat
ctggaaatcagtaacgcttttcagttgcgtccacgtcagttggggtgcctgaaattgtta
gccgcgtggcgccttaaccaggcccgtcagcgtgatctggccgttaattttgtcgtacgt
gaggaaaacctctggcaggtggcgcgctatcagccaacatcgctgggggagctggaagcg
ctggggctgagtggcccggaaattcgctatcacgggcgtacattgctggcgctggtggat
gaatctaatgcactggatgaaacggaacttcctgcaccgattttgaacctgatagatcag
ccgggttaccgcaaagtctttaaggatattaaggctcttattcagactgtcagtgaagag
agcaaactgagcgttgaaatgctggcatcacgtcgtcagattaatcagttactcacctgt
cactggaagctaaaagataaagaatcacaaccggaattaatcagtggctggcgcgggaag
ttgttagctgaaaggctaaatgacattttgagcaattattaa
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