Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3240
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Entry
Rahaq2_3240 CDS
T01770
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03030
DNA replication
raq03430
Mismatch repair
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rahaq2_3240
03430 Mismatch repair
Rahaq2_3240
03440 Homologous recombination
Rahaq2_3240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raq03032
]
Rahaq2_3240
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_3240
Enzymes [BR:
raq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rahaq2_3240
DNA replication proteins [BR:
raq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rahaq2_3240
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rahaq2_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AEX53048
UniProt:
H2IXB2
LinkDB
All DBs
Position
3455773..3456813
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AA seq
346 aa
AA seq
DB search
MIRVYPEQLAAQLREGLRACYVLCGNDPLLLQESQDSIRLAAQQADFQEHYTYILDAHTE
WESIFSICQALSLFASRQTLMLILPENGPTAPMAEQLLKLTTLLHDDILLLLRGTKLTKA
QENSAWFKALSDKGVFVSCQTPEQAQLPRWVTRRAKELSLELDEPANQLLCYCYEGNLLA
LAQSLERLSLLYPDGKLTLPRVEEAVNDAAHFTPYHWLDALLAGKSKRAWHILRQLQQED
SEPVILLRTVQRELLMLLHLKRKMDTTPIRTLFDQQKVWQNRRALVTQALQRLTLAQLSQ
AVRLLTQMEITLKQDYGQSVWAELESLSMLLCGKSLPTGFTELGSY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagtttatccggaacaacttgccgcgcagctccgtgaggggctgcgcgcttgt
tatgtattatgtggaaacgaccctttgcttttgcaggaaagccaggacagcatacgtctc
gcggcccagcaggctgacttccaggagcactacacgtatatacttgacgcccatactgaa
tgggagtctattttcagtatctgtcaggcactgagcctgtttgccagccgccagaccctg
atgcttattctgcccgaaaatggcccgacggcgccgatggcagaacaattactcaaactg
accaccctgctccacgacgatattcttctgctgttgcgcggcacaaaactgaccaaagcg
caggaaaacagcgcctggtttaaagcgttgagtgacaaaggtgtcttcgtcagttgtcag
acgcctgagcaggcacaacttccccgctgggtgacccgtcgcgccaaagaactttcgctt
gaactcgatgagccagctaatcagcttttgtgctactgctatgaaggaaatttgctggca
ctggcacagtcgctggagcgtctttccctgctctatcctgatggtaaacttacgctaccg
cgcgtcgaagaggccgttaacgatgcggcacatttcacgccttatcactggctggatgcg
ttgctggccgggaaaagtaagcgcgcctggcacattttgcgtcagttgcaacaggaagac
agcgaaccggttattttactgcgaaccgtgcagcgtgaactgctgatgctgctccatctg
aaacgtaaaatggacacgacgccgatcagaaccctgtttgatcagcaaaaagtctggcaa
aaccgccgggcactggtaactcaggcactgcaacgcctgacgcttgcccagttgtctcag
gccgttcgtctgctgacccaaatggaaatcacgctgaaacaggattatggtcagtcagtc
tgggccgagcttgaaagcctgtctatgctactctgtgggaaatccttacctactggtttt
acggagttgggttcgtattga
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