Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3510
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Entry
Rahaq2_3510 CDS
T01770
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rahaq2_3510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_3510
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rahaq2_3510
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rahaq2_3510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AEX53309
UniProt:
H2J066
LinkDB
All DBs
Position
complement(3724038..3724775)
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AA seq
245 aa
AA seq
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MEGWQRAFVLHGRPYSETSLMLDLFTEGQGRVRILAKGARGRRSNLKGCLQPFTPLLVRW
SGRGEVKTLRNAEPVSLALPLSGLMLYSGLYVNELVSRVLEQEANYSSLFFDYLNCLQNL
AGASGSPEYALRQFELSLLHHLGYGVDFLHCAGSGEEVSDNMTYRYREEKGFIASLVIDN
SSFTGRDLKALASREFPDLSTLRAAKRFTRMALKPYLGGKPLKSRELFRQFQVKRPVLPS
DNSSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcaacgcgcatttgttttgcatgggcgaccttacagtgaaaccagctta
atgctggatctgttcactgagggacaagggcgggtacgcatactggctaaaggtgcgcgt
ggccgccggtccaatttaaaaggctgcttgcagccttttacacctttactggttcgctgg
agcgggcggggagaagtgaaaaccctgcgtaatgctgaaccagtctctcttgcacttccc
ctttctggtttgatgctttacagcggtttatacgtcaatgaactcgtttcgcgggtgctt
gagcaggaagccaattactcttcattattctttgattatctcaattgcctgcaaaatctt
gcgggtgccagcggctctcctgagtatgcgttacgtcagttcgaactctctcttttgcat
catctgggttacggcgtggattttctgcattgcgcaggcagcggtgaagaagtcagcgac
aacatgacttaccgttatcgtgaagaaaaaggctttattgccagtctggtgattgataat
tccagctttaccggtcgggatttgaaagccctggccagccgtgaatttccggatctttca
acgctgcgggcggcgaagcgttttacccgtatggcgctgaaaccttatcttggcggcaag
ccgctgaaaagccgcgagctgttccgccagtttcaggttaaaaggcctgttttaccctct
gacaattcttcccgctaa
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