Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3512
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Entry
Rahaq2_3512 CDS
T01770
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Rahaq2_3512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raq03019
]
Rahaq2_3512
03009 Ribosome biogenesis [BR:
raq03009
]
Rahaq2_3512
03036 Chromosome and associated proteins [BR:
raq03036
]
Rahaq2_3512
Enzymes [BR:
raq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Rahaq2_3512
Messenger RNA biogenesis [BR:
raq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Rahaq2_3512
Ribosome biogenesis [BR:
raq03009
]
Eukaryotic type
90S particles
RNase
Rahaq2_3512
Prokaryotic type
rRNA processing factors
Rahaq2_3512
Chromosome and associated proteins [BR:
raq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Rahaq2_3512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AEX53311
UniProt:
H2J068
LinkDB
All DBs
Position
complement(3725689..3726369)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILDWYRSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSQPVVGTGSSRRKAEQAAAEQALIQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcgtaataaacaggcttcagcggaagctgggctacacttttcaacagcag
gagcttttattgcaggcactgactcaccgcagcgcaagcagtaaacacaatgagcgttta
gagttcctgggtgactcaattcttagttatgtcattgctaacgcgctgtaccatcgtttt
cctcgcgtagacgagggcgatatgagtcgtatgcgtgccacattagtacgtggaaatacg
ctagcggaaatggcgcgtgaattcgatctcggcgaatgtttacgcttagggccgggcgaa
ttgaaaagtggtggtttccgccgcgagtcgattcttgcggatacggtggaggcactcatt
ggcggcgtgttcctggacagtgatatccagaccgtcgaaaagctgattctcgattggtac
cgtagtcgtttggacgaaatcagtcccggtgataagcagaaagacccaaaaacccgctta
caggagtttttgcaaggtcgtcatctgccgttgccttcttatctggttgtgcaggttcgc
ggtgaagcgcacgatcaggagtttaccatccactgccaggtcagtggcttgagccagccg
gttgtaggaaccggttcaagtcgccgtaaagccgagcaggcggcagcggaacaagcgctg
atacagctggagcttgaatga
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