Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3839
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Entry
Rahaq2_3839 CDS
T01770
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq00061
Fatty acid biosynthesis
raq00071
Fatty acid degradation
raq01100
Metabolic pathways
raq01212
Fatty acid metabolism
raq02024
Quorum sensing
raq04146
Peroxisome
Module
raq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rahaq2_3839
00071 Fatty acid degradation
Rahaq2_3839
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rahaq2_3839
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rahaq2_3839
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
raq01004
]
Rahaq2_3839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
raq04147
]
Rahaq2_3839
Enzymes [BR:
raq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rahaq2_3839
Lipid biosynthesis proteins [BR:
raq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rahaq2_3839
Exosome [BR:
raq04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rahaq2_3839
Exosomal proteins of breast cancer cells
Rahaq2_3839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEX53621
UniProt:
H2IR43
LinkDB
All DBs
Position
complement(4075157..4076953)
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AA seq
598 aa
AA seq
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MNPTLNDYHLITRFRQQIITRAEQTAFREWSPAAVSALTWRELGEKVDALSDVLLQEQVG
VQERIAICGNNSMAWATADLAILQLRAVTVPVYATNTPAQSAYVLNDADIRILFVVGQKQ
YDAAVALRDLCPQLKHILVLDNEVDLRGVPIARHVSGIVPQNAALAAEREVRVNARDLSD
LFTLIYTSGTTGEAKGVMLDYRSMATQLRQHEKRLSISEHDVSLCFLPLAHVFERAWSFF
VMHCGAQNVFLRETDRVRDALQAIKPTVMCAVPRFYEKVFSAIHDKVARAGTLKKRLFHW
AVAQGKEKFLIERRGERYPFWLTPAHFLADKLVLKKLRDLLGGNLRFLPAAGASLDDNVI
LFFESLGLKIKYGYGLTETCATVTCWEEHDFRFGSVGTALPEIEVRIGEENEIQVRGPTL
LRGYFNKPEETAASFTSDGWFKTGDAGKMDAQGNVFITERLKDLMKTSGGKYIAPQRIEG
TLVQDRYIEQAAVIADERHFVSALIVPDFDVLNVYAQAHHIDYLNRTGLVKNEQILSLFA
HQLREIQHDLAGFEQVKKFVLLTKPFTMEAGELTPTLKLRRKIIFSRYQKEIDQLYQE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaccttaaatgattaccatctgattacccgttttcgtcagcaaatcattacc
cgtgctgaacagactgcatttcgcgaatggtcgccagcggcagtatctgccctgacctgg
cgtgaactgggtgagaaagtggatgccttatccgacgtgttattacaggagcaagtgggc
gttcaggaacgtatcgccatttgcgggaataattcgatggcctgggcgacggcagacctt
gcgatcctgcaattgcgtgctgtcaccgtcccggtttatgccaccaatacacccgcgcag
tctgcgtatgttcttaatgatgctgatatccgtattttgtttgtcgtcggtcagaaacaa
tatgacgcggcggtggctttgcgtgatctttgcccgcaactgaaacacattctggtgctg
gacaatgaggtcgatttacgtggcgtgccgattgcccggcatgtttcaggtattgttccc
cagaatgctgctttagctgccgagcgcgaagtgcgggtgaatgcccgtgacctcagtgat
ctgttcacgctcatctatacctcgggcaccaccggggaagcaaaaggcgtgatgctggat
taccgcagcatggcgacgcagcttaggcaacatgaaaaacgcctgagtatttcggagcat
gatgtttccctttgcttcctgccgctggcacacgtttttgaacgcgcatggagttttttc
gtgatgcattgcggtgcgcaaaacgtcttcctgcgcgaaaccgatcgggtacgtgatgct
ttgcaggccattaaaccgacagtaatgtgtgcggtcccgcgcttttatgaaaaagtattc
agcgcgatccacgacaaagtcgcccgtgcgggaaccctcaaaaagcgacttttccactgg
gccgtcgcgcagggcaaagagaagttcttgatcgagcgccgtggcgagcgttatccgttc
tggctgacgcctgcgcattttctcgctgataaactggtcctgaaaaagctgcgcgatttg
ctgggcggcaatctgcgttttctgccggccgccggtgcaagtctggatgataacgtcatt
ctgtttttcgaatcactcggtctgaaaatcaaatacggctacggtctgacggaaacatgc
gcgacggtcacctgctgggaggagcatgattttcgcttcggttctgtcggtacggcgttg
cctgagattgaagtacggatcggcgaggagaatgaaattcaggttcgcggcccgacattg
ctacgcggctatttcaataagcccgaagaaaccgccgccagtttcacatcggatggctgg
tttaaaacgggtgacgcggggaaaatggacgcgcagggaaatgtgtttatcactgagcga
ctgaaagatctgatgaaaacgtcgggcggtaaatacatcgctccgcagcgtatagaaggc
acgctggtgcaggatcgttatatcgagcaggcggcagtcatcgctgatgaacggcacttt
gtttctgcgctgatcgtgcctgattttgatgtgctgaacgtctatgcccaggcgcatcat
atcgattacctgaatcgcacgggactggtgaaaaatgagcagatcctctcgctgtttgcc
caccagttacgcgagattcagcatgatctggccggttttgaacaggtgaaaaagtttgta
ttgctgaccaaacctttcacgatggaggcaggcgagctgactcctacccttaaactgcgc
cgtaaaatcattttcagccgttatcagaaggaaatcgatcagctttatcaggagtaa
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