Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3853
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Entry
Rahaq2_3853 CDS
T01770
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raq03021
]
Rahaq2_3853
Transcription machinery [BR:
raq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Rahaq2_3853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEX53635
UniProt:
H2IR57
LinkDB
All DBs
Position
4094184..4097081
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AA seq
965 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ISCHEGWQLQVEEVVEDKGLLTYIGTRLDTGETGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQREQFRLEFGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPETLQHQWLVEMLRRFNLRFSLFDDDRYAESIH
EATNPFETEQLVICSLDFVRRNKSRLEQLSDAAWDMLVVDEAHHLVWSEDAPSREYQVIE
QLSQQIPSVLLLTATPEQLGQESHFARLRLLDPDRFHDYEEFIEEQQQYQPVADAVTLLL
NKEPLTPEALALLGESVGNADTDALLTAANKGDEAAAKQLVSMLMDRHGTSRVLFRNTRN
GVKGFPERHLHAVKLPLPTQYQTAIKVSGIMGAKKTAEARAHDMLYPEQIYQEFEGENAT
WWNFDPRVEWLLGYLTANRDEKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSIIER
DRAAAYFASQEEGAQVLLCSEIGSEGRNFQFASKMVMFDLPFNPDLLEQRIGRLDRIGQQ
NNIDIMVPYLEQTAQSVLVRWFHEGLDAFEHTCPTGRTIYDSAYDQLIAFLATPAAQEGL
DAFILECRAEHDALKEKLENGRDRLLEMHSNGGERAQQLAKEIGEQDNDVNLVNFALNLF
DIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTVTFDREQALSREDAQFISWEHPI
VRNGLDLILSGDTGSCAVSILKNKALPVGTLLAELVYVVECQAPKHLQLTRFLPPTPVRM
LMDRKGTNLAAQVEFESFNRQLNAINRHNSSKLVNAVQQDVHAMLQQAEAEIAEQARALI
EAAKVEADEQLTQELDRLKALKEVNPNIRDDELESVDSNRKQVLANLNDASWRLDAIRLV
VVSHQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttacattgggtcaacgctggataagcgatacggaaagcgaattaggattagga
accgtggtagcgctggatgtgcgcatggtcaccctgcttttccccgccaccggtgaaaac
cgtttgtatgcccgaaatgattccccgatcacccgcgtgatgttcaaccccggtgatacc
atcagctgtcacgaaggctggcagttgcaggtcgaagaagtggttgaagataaaggtctg
ttgacctatatcggcacccgtctggacacgggagaaaccggcgttgccatgcgtgaagtg
ctgctcgacagcaaactgaccttcagcaaaccgcaggatcgcctgttcgccggtcagatt
gaccgcatggaccgcttcgccctgcgttttcgcgcccgtaaatatcagcgtgaacagttc
cgtctggaattcggcgggctgcgcggtatgcgcgccagtctgatcccgcatcagttgcac
atcgcttacgaagtcggtcagcgtcatgcgccgcgcgttttactggccgatgaagtgggt
ctgggcaaaaccatcgaagcgggcatgattattcatcagcaactgttgtccggccgtgct
gaacgcatactgatcgtggtgccggaaaccttgcaacaccagtggctggtagaaatgctg
cgccgcttcaatctgcgcttctctttgtttgacgacgaccgctacgctgaatccatccac
gaagcaacaaacccgtttgaaactgaacaactggtgatctgttcccttgatttcgtgcgc
cgcaataaatcccgtcttgagcagttatccgatgctgcctgggacatgctggtggtcgac
gaagcccaccatctggtgtggagcgaagacgcgccgagccgcgaatatcaggttatcgaa
cagctttcccagcaaatcccgagcgttctgctgctgaccgctacgccggaacaactggga
caggaaagccactttgcgcgtctgcgcctgctggatccggaccgtttccacgattacgaa
gaattcatcgaagaacaacagcaatatcagccggtggctgatgccgtgacactgttgctc
aataaagagccgctgacgccggaagccctggcgctgctgggtgaaagtgtcggcaatgcc
gataccgatgccctgctgaccgccgccaataaaggcgacgaagccgccgcgaaacagctg
gtttccatgctgatggaccgtcacggcaccagccgcgtgctgttccgtaatacccgtaat
ggcgtgaaaggtttcccggaacgtcatctgcatgccgtgaaacttccgctgccgacgcag
tatcagaccgcgattaaagtctccggtattatgggcgcgaagaaaaccgccgaagcgcgt
gcgcacgacatgctgtatccggaacagatttatcaggaattcgaaggcgagaacgccacc
tggtggaactttgatccacgcgtcgaatggctgctcggttatctgaccgccaaccgcgac
gaaaaagtcctggtgatctgcgctaaagccgccactgcattgcaactggaacaggttctg
cgtgagcgtgaagcgatacgcgctgcggtgttccacgaaggtttgtcgatcatcgaacgt
gaccgcgccgccgcttactttgcttcccaggaagaaggcgcacaggttctgctgtgttct
gaaatcggctccgaaggccgtaacttccagttcgccagcaaaatggtgatgttcgacttg
ccgttcaacccggatctgctggaacagcgtatcgggcgtctggatcgtatcggtcagcaa
aacaatatcgacatcatggtgccttacctcgagcagaccgcgcagtcggtgctggttcgc
tggttccatgagggtctggacgcgttcgaacatacctgtccgaccggccgcaccatttac
gacagcgcgtacgatcagttgattgcgttcctggcgacacctgccgcgcaggaaggtctg
gacgcgttcattctcgaatgtcgcgccgaacatgacgcgctgaaagagaagctggaaaat
ggccgcgaccgcctgctggagatgcattccaacggcggcgaacgtgcacagcaactggcg
aaggagatcggtgagcaggataatgatgtcaatctggtgaactttgcgctgaatctgttt
gatatcgtcggtattaatcaggaagatcgcagcgataacctgatcgtcctgacgccgtct
gatcacatgctggtgccggatttccctggcttgccggaagacggttgtaccgtgacattc
gatcgtgaacaggcgctctcgcgtgaagatgcgcagttcatcagttgggaacatccgatc
gtgcgtaacggtctggatctgatcctttccggcgataccggcagttgtgcggtatcgatc
ctgaaaaacaaagcgctgccggtaggaactctgctggcggaactggtttacgtggtggaa
tgtcaggcgccgaaacatctgcaactgacccgcttcctgccaccgacaccggtgcgtatg
ctgatggatcgcaaaggcaccaatctggcggctcaggtagaattcgaaagctttaaccgt
cagctgaacgccatcaaccgccataactccagcaagctggtgaatgcggtacagcaggat
gttcacgccatgctgcaacaggctgaagcggaaattgcggaacaggcgcgtgccctgatt
gaggccgcgaaagtggaggctgacgagcaactgacccaagagctggatcgcctgaaagcg
ctgaaagaagtgaacccgaacattcgtgatgacgaactggaatcggtagactcgaaccgt
aagcaggtgctggcgaatctgaacgatgccagctggcgtctggatgcgatccgccttgtg
gtggtcagccatcagtaa
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