Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3906
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Entry
Rahaq2_3906 CDS
T01770
Name
(GenBank) response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq02020
Two-component system
raq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rahaq2_3906
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rahaq2_3906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raq03000
]
Rahaq2_3906
Transcription factors [BR:
raq03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
Rahaq2_3906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
CusS
HTH_40
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AEX53686
UniProt:
H2IRY0
LinkDB
All DBs
Position
4159711..4160391
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AA seq
226 aa
AA seq
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MSSLIVDKCYYTQLALHSLLQLNGQNQKDILSLKDINELQATCNSLTPEIIFVNEDCFTS
DAQSGHALRKVIDAHPGTLFFIFISKENLNYQNYVPIRKNIIILSKSIRTTTIYQLIAHN
LLLSRSAEVEQLLDLTPVSLSRTESSILKMWMSGLNTQNISQHLNIKQKTVASHKGNIKR
KVKTQNKQAIYHVVKLTDILTSGMFVGRTQPLRPTSEPDEFSVPFG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgctcattgtagataaatgctattacacacagctggcattgcattcgctattg
caattaaacggacaaaaccagaaagacattctttcgctcaaggacatcaacgaactgcaa
gcgacatgcaattccctgacgcctgaaatcatcttcgtgaatgaagattgctttacgtct
gatgcacaatcaggtcacgccctgcggaaagtgatcgacgcgcatcccggcacgcttttc
tttatttttatttccaaagaaaatctgaattatcagaactatgtgccgatccgtaaaaac
atcattattttgtccaaatccatcaggacaaccacgatttatcagctgatcgcccataac
ctgttgctgtcgcgctcggcagaagtggaacaattgctggatctcacaccggtcagcctg
agccggactgaatccagtatcctgaaaatgtggatgtcggggctgaacacgcaaaacatt
tcccagcacctgaatatcaagcaaaaaacggtggcgtcacacaaaggaaatatcaagcgt
aaagtgaaaactcaaaataaacaggctatttatcatgttgttaaactcaccgatattctg
acgtccggaatgtttgtcggccgcactcagccactgcgcccgaccagcgaaccggatgaa
ttcagcgttccgttcggctga
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