Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_3913
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Entry
Rahaq2_3913 CDS
T01770
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_3913
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rahaq2_3913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
SLFN-g3_helicase
AAA_22
AAA_14
ABC_tran
Rad51
RecA_N
AAA_16
nSTAND3
nSTAND_NTPase5
NTPase_1
AAA_24
AAA
cobW
Zn_ribbon_Thio2
Viral_helicase1
AAA_5
AAA_11
AAA_30
DZR
AAA_29
Zeta_toxin
T2SSE
NPHP3_N
Herpes_Helicase
tRNA-synt_1f
PAXNEB
DUF1541
KTI12
Motif
Other DBs
NCBI-ProteinID:
AEX53693
UniProt:
H2IRY7
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All DBs
Position
complement(4168518..4169900)
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AA seq
460 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACQAWNSITEIRLAASPTVARNERLTGYAGDAGV
SRVQKLSDISLDELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQILCHLS
ENMKTLYVTGEESLQQVAMRAHRLSLPTANMNMLSETSIERICEIADIEQPKLMVIDSIQ
VMHMADIQSSPGTVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSV
MVLWEGTRPLLVEVQALVDQSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERITEAA
KHGFKRAIVPHANVPKKLPAGMQVFGVKKLADALAILDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaagcagcaaaacgtgcatttgtgtgtaatgaatgtggcgcagattatccgcgc
tggcaagggcagtgtagtgcctgtcaggcctggaacagcattactgaaatccgtttggcc
gcttccccgactgtggcgcgtaacgaacgtctcaccggttacgccggtgatgcgggggtc
agccgcgtgcagaaactttctgatatcagccttgatgaactgccgcgtttcagcaccggt
tttaaagaattcgaccgcgtattaggcggcggcgtggtgccgggcagtgcgattctgatt
ggcggtaaccccggtgccggtaaaagtacgttgctgttgcaaattctctgtcatctcagc
gaaaacatgaaaaccctgtatgtcaccggggaagaatcgctgcaacaggttgcgatgcgc
gcacaccgtctgagtttaccgacggctaacatgaatatgttatcggaaaccagcatcgaa
cggatttgcgaaattgcagatattgaacagccgaaactgatggtgatcgactccattcag
gtgatgcacatggcggatatccagtcgtcaccgggtacggtcgcgcaagtgcgtgaaaca
gcggcctatctgacgcgtttcgctaaaacgcgcggtgtggcgatcgtcatggtcggtcat
gtcactaaagacggttcgctggcggggccgaaagtgctcgaacattgtattgactgttcc
gtgctgctcgacggcgatgccgattcgcgtttccgtacgctgcgcagccacaaaaaccgc
tttggtgccgtgaacgaactgggcgtattcgccatgaccgaacagggactgcgtgaagtc
agcaatccgtcggcaatttttctcagccgtggggatgaaatcacctccggtagctccgtg
atggtgttgtgggaagggacgcgcccgctgctggttgaggttcaggcgctggtcgatcag
tcgatgatgggtaacccgcgtcgtgtggcggtcggtcttgagcagaatcgtctggccata
ttactggctgtgctgcaccgtcatggcggcttgcagatggcggatcaggatgtctttgtg
aacgtggtcggtggcgtgaaagtcaccgaaaccagtgccgatctggcgctgctgctgtcg
ctggtctccagcctgcgtgaccgtccgttgccacaggatttggtggtgttcggtgaagtc
gggctggcgggggaaatccgcccggtgccgagtggtcaggagcggattaccgaagcggca
aagcacggtttcaaacgcgccattgtgccgcatgccaacgtgccgaaaaagttgcctgcc
ggtatgcaggtttttggcgtcaaaaagctggctgatgcgctggcgatcctcgacgatttg
taa
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