Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4235
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Entry
Rahaq2_4235 CDS
T01770
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq00730
Thiamine metabolism
raq01100
Metabolic pathways
raq01240
Biosynthesis of cofactors
Module
raq_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rahaq2_4235
Enzymes [BR:
raq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Rahaq2_4235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AEX53997
UniProt:
H2IVU2
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Position
4506554..4508518
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AA seq
654 aa
AA seq
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MSSTQKPVISEKKPSNRREQRAQAQSFIDSLQGEAFPNSRRIYLESDRQDIRVPMREIQL
SPTLVGGGKDNPQFEENEAIPVYDTAGPYGDPAAVIDVHTGLEKLRARWINERADTEELP
QVSSGFTQQRLADDGLDHLRFEHLPRPRKAIAGKNVTQLHYARKGIITPEMEFIAIRENM
GRERIRGEVLRQQHPGESFGAHLPTNITAEFVRQEVAAGRAIIPANINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGVAEDLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGI
VSRGGSIMAKWCLSHHRESFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFA
ELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSM
KITQEVRDYAATLEAKAQPVEIVESGMAQMSVEFHSRGSELYHPADKLSSEISK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtacccaaaaacccgttatttctgaaaagaaaccgtcaaaccgccgcgaacag
cgcgcgcaggcacagtcgtttatcgacagtctgcagggcgaggcctttcctaactcccga
cgtatttatcttgaatctgaccgccaggatatccgcgtgccaatgcgtgaaatccagctc
agcccgacgctggtcggcggcggtaaagacaatccgcagttcgaagaaaacgaagcgatt
cctgtttacgacaccgccgggccttacggcgatccggcggcggttatcgatgtgcatacc
ggtctggaaaaattacgcgcccgttggataaacgagcgtgcggacacggaagaactccca
caagtcagttccggttttacccagcagaggctggcggatgacgggctggatcacctccgc
ttcgaacacctgccgcgcccacgcaaagccattgcaggcaaaaatgtcacgcaactgcat
tacgcccgcaaaggcatcatcacgcctgagatggaatttatcgccattcgcgaaaatatg
gggcgtgaacggatccgtggcgaggttctgcgccagcaacatcccggggagagctttggt
gcgcatttgcccaccaatatcaccgcagagtttgtgcggcaggaagtcgctgccggtcgc
gcgattattcccgccaacatcaaccatcctgaatcagagccgatgatcatcgggcgcaat
ttcctggtgaaagtaaacgctaatatcggcaactcggcggtgacgtcttccatcgaagaa
gaagtcgagaaactggtgtggtccacacgctggggggctgacaccgtgatggatctctcc
accggccgttatatacatgaaacccgtgaatggatcctgcgtaatagcccggtaccgatc
ggcactgtgccaatttatcaggcactggaaaaagtgaatggcgtggccgaagatctgaac
tgggaaatgttccgcgatacgttgctggaacaggccgaacaaggtgtcgattacttcacc
attcacgccggggtattgctacgttacgtgccgatgaccgccaaacgtctgaccgggatt
gtgtcgcgcggcggttcgatcatggcgaaatggtgtctttcacatcatcgcgaaagtttc
ctgtttgagcatttccgcgaaatctgtgaaatctgcgccgcctatgatgtttcgctgtca
ctgggagacggcttgcgccctggctccattcaggatgccaacgacgaagcacaatttgcc
gaattacgtacgttaggggaactgaccaaaatcgcctgggaatatgatgttcaggtgatg
atcgaaggaccgggacatgtgccgatgcagatgatccgccgcaacatgaccgaagaactt
gaacattgccacgaagcgcccttctataccctcggcccgctgaccaccgatatcgcaccg
ggttacgaccatttcacctccggtattggtgccgcgatgatcggatggttcggctgtgcc
atgctttgttatgtcacgccgaaagagcatctcggcctgccgaacaaagaagatgttaaa
cagggtctcatcacctacaaaatcgccgcgcatgccgccgatttagcgaaaggacatccc
ggtgcccaaattcgcgacaacgccatgtcaaaagcacgtttcgaattccgctgggaagac
cagtttaatctggctctcgatcccgcaacagctcgtgcctatcacgatgaaacgctgcct
caggaatccggcaaagtggcacacttctgctcgatgtgcggtccgaaattctgctcaatg
aaaatcactcaggaagttcgcgattatgccgcaacgctcgaagccaaagcccagccggta
gaaattgttgaatccggtatggcacagatgtctgtcgaattccattcgcgcggcagcgag
ctttatcacccggccgataagctcagttcggagatcagcaaatga
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