Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4308
Help
Entry
Rahaq2_4308 CDS
T01770
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raq03021
]
Rahaq2_4308
Transcription machinery [BR:
raq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rahaq2_4308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
SANT_DAMP1_like
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AEX54061
UniProt:
H2IWL2
LinkDB
All DBs
Position
complement(4586339..4587196)
Genome browser
AA seq
285 aa
AA seq
DB search
MTKEMRTLALVPQGSLEAYVRAANAYPMLTAEEERALAERLHYNGDLEAAKELILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKNKQRLGWFSHDEVEHVARELGVTSKDVLEMESRMAAQDM
TFDPTPDDEPRDGAAMAPMLYLQDKSSDFAETIEEDNWDQDATDKLSYAMEGLDERSQDI
IRARWLDDDNKSTLQELADKYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcgcactttagcattagtaccccaaggtagcctggaagcctatgtt
cgggcagccaatgcctatcctatgcttaccgcagaggaagaacgggcgctggctgaacgg
ctgcattacaacggtgacctggaagcagcgaaagagctgatcctgtctcacctgcgcttt
gttgctcacattgcccgcaactattcaggctacggtttgccacaggcagaccttatccag
gaagggaacatcggcctgatgaaagcggtacgtcgctttaatccggaagtcggtgtgcgt
ctggtatcctttgccgtgcattggatcaaagcagaaattcacgaatatgtgctgcgtaac
tggcgcatcgtgaaagtcgctaccaccaaagcgcagcgtaagctgttcttcaacctgcgt
aaaaacaaacagcgtctgggctggttcagccacgacgaagtcgagcacgtcgcccgcgaa
ctgggtgtgaccagcaaagatgtgctggaaatggaatcacgcatggccgcacaggacatg
acgtttgatccgacgccggatgatgaaccacgcgacggcgcagcgatggcaccgatgttg
tatctgcaagataaaagttccgactttgcagaaaccatcgaagaagataactgggatcag
gacgcgaccgataaactttcctatgcaatggaaggtctggacgaacgcagccaggatatc
atccgcgcacgctggttagacgatgataacaaatcgaccctgcaggaactggccgacaaa
tacggtgtttccgcagaacgtgttcgtcagctggaaaagaatgcgatgaaaaaattgcgt
atggcgatcgaagcctga
DBGET
integrated database retrieval system
