Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4376
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Entry
Rahaq2_4376 CDS
T01770
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rahaq2_4376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raq03021
]
Rahaq2_4376
03019 Messenger RNA biogenesis [BR:
raq03019
]
Rahaq2_4376
Transcription machinery [BR:
raq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Rahaq2_4376
Messenger RNA biogenesis [BR:
raq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rahaq2_4376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AEX54122
UniProt:
H2IWS3
LinkDB
All DBs
Position
complement(4656641..4657900)
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLIALGENMGLENQARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtctctgacctgattgcactcggcgaaaat
atgggactggaaaaccaggcccgcatgcgcaagcaagacattatcttttcaatattgaag
cagcatgctaaaagcggagaagacatcttcggtgatggcgtactggagatattgcaggat
ggatttggtttcctccgctccggagacagttcctacctcgcaggccccgacgacatctac
gtatctccaagccaaatccgccgcttcaaccttcgtactggcgacaccatttccggtaaa
atccgtccaccaaaagaaggtgaacgttattttgccctgttgaaagttaacgaagttaac
tacgacaagccagaaaacgcccgcagcaaaattctgttcgaaaacttaacccctctgcat
gcaaattcacgtctgcgtatggaacggggtaacggttcaacagaagatttgaccgctcgc
gtactggacttagcttctccaattggccgcggccaacgtggtctgattgttgctccgccg
aaagccggtaaaaccatgctgctgcaaaacatcgctaccagcattgcgtacaaccatcct
gactgcgtgctgatggttctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagttatcgcttctacctttgacgagccagcttcccgacatgtt
caggtagccgaaatggttatcgagaaagccaagcgcctggttgagcataaaaaagacgtt
atcattctgctggactccattacccgtcttgctcgtgcttacaacaccgtggttccggcc
tcaggcaaggtgctgaccggtggtgtggacgccaacgccctgcaccgtccaaaacgtttc
ttcggtgctgcgcgtaacgtggaagagggcggcagcctgaccatcatcgcaactgcgctg
gtcgataccggttctaaaatggatgaagttatctatgaagagtttaaaggtaccggcaac
atggaattacacctggcgcgtaaaatcgctgaaaaacgtgtattccctgcgatcgactac
aaccgctctggtacccgtaaagaagagctgttgaccacttctgaagaactgcaaaaaatg
tggatcctgcgtaaaatcattcacccgatgggtgagattgatgcgatggaattcctcatc
aacaagcttgcaatgactaagacaaatgacgacttcttcgacatgatgaaacgttcgtaa
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