Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4510
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Entry
Rahaq2_4510 CDS
T01770
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03030
DNA replication
raq03410
Base excision repair
raq03420
Nucleotide excision repair
raq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rahaq2_4510
03410 Base excision repair
Rahaq2_4510
03420 Nucleotide excision repair
Rahaq2_4510
03440 Homologous recombination
Rahaq2_4510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raq03032
]
Rahaq2_4510
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_4510
Enzymes [BR:
raq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rahaq2_4510
DNA replication proteins [BR:
raq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rahaq2_4510
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rahaq2_4510
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rahaq2_4510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AEX54247
UniProt:
H2IYC1
LinkDB
All DBs
Position
complement(4803007..4805799)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYAPSHVAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LALEAEQAGHAVLISTGDKDMAQLVTPGVTLINTMNNTILGPDEVVEKYGVPPSLIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGSKTMAAKLAENK
DVAYLSYQLATIKTDVKLDLTCAELTVSEPNADELHQLFGRYEFKRWLADVESGTWLSGK
KSSGKAKKGATAQESATTAPVEPNQLSQDGYVTILDQETLDEWIGYLKASDVFAFDTETD
GLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKPLLEDEKQRKVGQ
NLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSFEEIAGK
GKNQLTFNQIGLEQAAPYAAEDADVTLQLHQALWPRIAQSESLKTVFTDIEMPLVPVLSH
IERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQKLPIL
KKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYLILAADYSQIELRIMAHLSK
DEGLLKAFAEGKDIHRATASEVFGTPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRKESQRYMDLYFERYPGVLEYMERTRAQASEQGYVETLDGRRLYLPDIKSSNAMRRKGA
ERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRVRIIMQVHDELVFEVHKDDVEAASE
KIRTLMEASMKLAVPLKVDVGTGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagcagaaaaccccttaatcctggtagacggttcgtcttacctttatcgc
gcttatcatgcgttccctccgctgaccaactctgcgggagaaccgaccggcgcgatgtac
ggtgtgcttaacatgttgcgcagtttattgctgcaatacgcaccaagccatgttgctgtg
gtttttgacgcgaaaggcaaaaccttccgtgacgaacttttcgaacagtacaaatcacac
cgtcctccgatgccggacgacctgcgctctcaaattgaacctcttcaccaaatggtcaaa
gcaatggggctgcctttgctggtggtctctggtgtagaagcggacgacgtgattggtacg
ctggcacttgaagctgaacaggcgggtcatgctgttttgatcagcactggtgataaggat
atggcacagctcgtgaccccaggcgtgacattgattaataccatgaacaatacgattctg
gggccagatgaagttgtcgagaaatacggtgttccgccttcactgatcattgatttcctc
gctttgatgggcgattcctcggataacatcccgggcgtgccgggtgtaggcgagaaaact
gcacaggctttgttacagggcattggcggtcttgatgctctgtatgctgatcttgataaa
gtgtcgacgctcagttttcgtggttccaaaaccatggcggctaaactcgctgagaataaa
gacgtcgcttatctctcttaccagctggcgactattaaaacggacgttaagctggatctg
acctgcgcagagctgacagtttcagaaccgaatgcggatgaacttcaccagttatttggt
cgctatgaattcaaacgctggctggctgatgttgaatccgggacctggctgagcggtaaa
aaatcctcgggtaaagcgaaaaaaggcgctaccgctcaggaatcggccaccactgcgcct
gttgaacctaaccagctttctcaggacggttacgtcaccattttggatcaggagacgctt
gatgaatggatcggttatctgaaagcgtcggatgtgtttgcattcgatacagaaacggat
ggtctggatacgctgactgccaatctcatcggtttatctttcgccacggaagcgggtaaa
gcggcgtatctgcctgttgcgcatgattacctggatgcgccggtacagttggatcgcgat
gaagtgttgaaacaactgaagcctttactcgaagatgaaaagcagcggaaagtcggtcag
aacctgaagttcgaccggggcgtgttactgcgttatgacatagaattaaaaggtatcgcc
ttcgataccatgcttgaatcctatgtgcttgacagcgtatctggccgacatgatatggac
agcctggccgatcgttatcttggccataaaaccgtcagctttgaagagatcgcgggtaaa
ggtaaaaaccagctgaccttcaatcaaatcggacttgagcaagcggcaccgtatgcggcg
gaagatgctgatgtcacgttgcagttgcatcaggcactttggcctcgtattgcgcaaagc
gaatccctgaagacggtattcacggacatcgaaatgcctctggtgcctgtgttgtctcat
attgaacgcaccggtgttctgattgatcagaacatcctcgctgcccattcgaaagaactg
gctattcgtctgaatgagctcgaaaacaaagcgcatgaactggcagaagagcctttcaac
ctgtcttcgaccaaacagttgcaggccattctgtatgaaaaacagaaattaccgatcctg
aagaaaacgccgggtggcgccccgtcaaccaatgaagaagttttggctgagctggctctg
gattatccgctgccaaaagtcattcttgaatatcgtggtctggcaaaactgaaatcgact
tataccgacaaactgccattgatgatcaatccgcagtccgggcgcgttcatacgtcttat
caccaggctgtgacggccaccgggcgtctgtcttccagcgatccaaacctgcaaaacatt
ccggtgcgtaatgacgaaggccgccgtatccgccaggcgtttattgcaccaaaagattac
ctcattctggctgcggattactcacaaattgaactgcgtattatggcgcatttatcgaaa
gatgaaggtttgctgaaagcgtttgctgagggtaaagatatccaccgtgcgacagcctct
gaagtcttcggtacgccactcgacagcgtgactggcgaacagcgccgtagcgcaaaagcg
attaactttggcctgatttacggcatgagtgcctttggtttatcacgccagttgaatatc
ccgcgcaaagaatcccagcgttatatggatttgtattttgagcgctatccgggcgtgctg
gaatacatggagcgtacccgtgctcaggcttctgaacagggttatgttgaaacgctggac
ggtcgccgtctgtatctgccggacattaaatccagcaatgccatgcgccgcaaaggtgct
gagcgtgcagcaatcaacgccccgatgcagggaacggcagcggatatcatcaagcgagca
atgatcagcgtcgctgactggctgaaacaaccggatgcgccgcgtgtccgcattatcatg
caggtacacgatgaactggtgtttgaagtgcataaagatgacgttgaagcagcaagcgag
aaaatccgcactctgatggaagcaagcatgaagctggctgttccgctgaaagtggatgtg
ggtaccggcgaaaactgggatcaggcacactaa
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