Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4709
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Entry
Rahaq2_4709 CDS
T01770
Name
(GenBank) transcriptional regulator with HTH domain and aminotransferase domain
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raq03000
]
Rahaq2_4709
Transcription factors [BR:
raq03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Rahaq2_4709
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_Crp_2
HTH_11
Rrf2
HTH_41
NirdL-like_HTH
Fe_dep_repress
TrmB
Beta_elim_lyase
HTH_36
HTH_46
Motif
Other DBs
NCBI-ProteinID:
AEX54433
UniProt:
H2J1I6
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Position
pRahaq201:complement(145911..147455)
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AA seq
514 aa
AA seq
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MRSLLSDLILQRLTELSDALPGTLNKRLYQALQQAIFDGSISPGSRLPASRDLAKELNIS
RNTVLAAYEQLQAEGYIQTRSGSGTFVPADLPKDGVFADKTPTRCTPVRSHVSLSKRGSQ
LLTRTGVASHQWGAFMPGVPDVTKFPHDIWRKLQNRLSRRLSPEFLTYSGHGGCPQLQHA
LADYLRIARSVDCTADQILITAGTHQALDLLAKMLCDPGDTAWIEEPSYWGIRNVLTING
VDIQPVPVDENGLNPPDSPPQDRAPKLICVTPSHHYPLGSVMSLARRQKILAIASQQGSW
VVEDDYDSEFRYSGSPIPALQGLSSDAPVIYIGTFSKTMYPAMRISYVVLPRPLASRLKI
AHSELYRAGNGLTQLTLAQFIREGHYAAHIRRMRLLYGRRRNALIRLIEQELGPEFLCEN
SNAGLHLILSLPDSIDDVALSAELEQKKILTRPLSAYYLRPAPRRGLLLGYGCVPEEEIE
TTFGHIVDCLRRRLQSGGAIPLTDNEALPKRGIA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctcattgctttctgacctcattttgcaacgtctcactgagctttcagatgccctg
cccggcacgctgaacaagcggctttatcaggcattacaacaggctatatttgatggcagt
atttcccctggcagccgtttaccagcctcaagagaccttgccaaagagctgaatatttcg
cgcaacacagtgctggctgcctacgagcagttgcaggccgaaggctacattcagacccgc
agcggaagtggtaccttcgttcccgcagatttaccgaaagacggcgtattcgccgataaa
acacccacgcgctgcactccggttcgcagccacgtgtcactttccaagcgcggttctcaa
ttgctgacgcgtaccggtgttgcctcgcatcagtggggcgcgtttatgccgggcgtaccg
gacgtcaccaaatttccgcatgacatctggcgtaaattgcagaaccgcctgagccgtcgt
ctgtctcccgaatttctcacctactccggtcatggtggctgcccgcaactgcagcatgcg
ctggcagattatttgcgtattgcgcggtctgttgactgcacggcagatcagatcctgatc
accgccggtacccatcaggcgctggacttgctggcgaaaatgctctgcgaccccggcgac
acggcctggattgaggagccgagttactggggaattcgtaacgtgctgaccatcaacggc
gttgatattcagccggtgccggtggacgaaaacgggctgaacccgcctgacagtccgcca
caggaccgtgcaccgaagctgatatgcgtgacaccgtcacatcactatccgcttggttcg
gtgatgagcctggcccggcggcaaaaaattcttgccatcgccagtcagcaaggtagctgg
gtggtggaagatgattacgacagtgaatttcgctattcaggcagcccgatccccgcgttg
cagggactgagcagcgatgcgccggtgatttacatcggtactttcagtaagacaatgtat
ccggcaatgcggataagttacgtcgtgctgcctcgcccgctggcctcacgcctgaaaatt
gcgcactccgaattgtaccgtgccggtaacggactcacgcaactcacgctggcacaattt
attcgcgaagggcattacgccgctcatatccgccggatgcgattgctttacggcaggcgg
cgtaatgccctgatacggcttatagaacaggaactcggcccggaatttctgtgtgaaaac
agtaacgccggtctgcatctgattttgtcactgcctgattcgattgatgatgtggcgctg
agcgcagagctggagcagaaaaaaattctcacgcggccgctgtcggcatattacctgcgc
cctgccccgcggcgcggacttttgctcggttacggctgcgttcctgaagaagaaattgaa
acgactttcgggcatatcgtcgattgtttgcggcgcaggctgcaatccggtggtgcaatc
ccacttaccgataatgaggcgctacccaaaagagggattgcctga
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